Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3318 and Dshi_3319 are separated by 54 nucleotides Dshi_3319 and Dshi_3320 are separated by 13 nucleotides Dshi_3320 and Dshi_3321 are separated by 197 nucleotides Dshi_3321 and Dshi_3322 overlap by 4 nucleotides
Dshi_3318: Dshi_3318 - D-3-phosphoglycerate dehydrogenase (RefSeq), at 3,481,012 to 3,482,607
_3318
Dshi_3319: Dshi_3319 - metallophosphoesterase (RefSeq), at 3,482,662 to 3,483,396
_3319
Dshi_3320: Dshi_3320 - hypothetical protein (RefSeq), at 3,483,410 to 3,483,616
_3320
Dshi_3321: Dshi_3321 - CreA family protein (RefSeq), at 3,483,814 to 3,484,269
_3321
Dshi_3322: Dshi_3322 - transcriptional regulator, LacI family (RefSeq), at 3,484,266 to 3,485,303
_3322
Position (kb)
3482
3483
3484 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3482.110 kb on + strand, within Dshi_3318 at 3482.508 kb on + strand at 3482.566 kb on - strand at 3483.120 kb on - strand, within Dshi_3319 at 3483.165 kb on + strand, within Dshi_3319 at 3483.175 kb on - strand, within Dshi_3319 at 3483.250 kb on - strand, within Dshi_3319 at 3483.259 kb on + strand, within Dshi_3319 at 3483.341 kb on - strand at 3483.341 kb on - strand at 3483.416 kb on - strand at 3483.555 kb on - strand, within Dshi_3320 at 3483.659 kb on + strand at 3483.659 kb on + strand at 3483.667 kb on - strand at 3483.667 kb on - strand at 3483.667 kb on - strand at 3483.674 kb on + strand at 3483.680 kb on + strand at 3483.682 kb on - strand at 3483.682 kb on - strand at 3483.688 kb on + strand at 3483.842 kb on + strand at 3483.880 kb on - strand, within Dshi_3321 at 3483.955 kb on + strand, within Dshi_3321 at 3483.965 kb on + strand, within Dshi_3321 at 3484.103 kb on + strand, within Dshi_3321 at 3484.257 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 3,482,110 + Dshi_3318 0.69 -2.4 3,482,508 + +0.1 3,482,566 - -0.1 3,483,120 - Dshi_3319 0.62 -0.3 3,483,165 + Dshi_3319 0.68 +2.1 3,483,175 - Dshi_3319 0.70 +0.0 3,483,250 - Dshi_3319 0.80 +0.4 3,483,259 + Dshi_3319 0.81 +0.4 3,483,341 - +0.6 3,483,341 - +0.4 3,483,416 - -0.0 3,483,555 - Dshi_3320 0.70 -2.6 3,483,659 + -2.2 3,483,659 + -0.6 3,483,667 - -0.6 3,483,667 - -0.8 3,483,667 - -0.5 3,483,674 + -1.1 3,483,680 + -0.4 3,483,682 - -0.1 3,483,682 - +1.5 3,483,688 + -0.5 3,483,842 + -1.4 3,483,880 - Dshi_3321 0.14 -0.3 3,483,955 + Dshi_3321 0.31 +0.5 3,483,965 + Dshi_3321 0.33 -1.2 3,484,103 + Dshi_3321 0.63 +1.9 3,484,257 + -0.2
Or see this region's nucleotide sequence