Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3289 and Dshi_3290 are separated by 126 nucleotides Dshi_3290 and Dshi_3291 are separated by 38 nucleotides Dshi_3291 and Dshi_3292 are separated by 29 nucleotides Dshi_3292 and Dshi_3293 are separated by 5 nucleotides
Dshi_3289: Dshi_3289 - AMP nucleosidase (RefSeq), at 3,455,298 to 3,456,767
_3289
Dshi_3290: Dshi_3290 - Glyoxalase/bleomycin resistance protein/dioxygenase (RefSeq), at 3,456,894 to 3,457,313
_3290
Dshi_3291: Dshi_3291 - NAD-dependent epimerase/dehydratase (RefSeq), at 3,457,352 to 3,458,224
_3291
Dshi_3292: Dshi_3292 - hypothetical protein (RefSeq), at 3,458,254 to 3,459,135
_3292
Dshi_3293: Dshi_3293 - hypothetical protein (RefSeq), at 3,459,141 to 3,459,959
_3293
Position (kb)
3457
3458
3459 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3456.803 kb on + strand at 3457.052 kb on - strand, within Dshi_3290 at 3457.241 kb on + strand, within Dshi_3290 at 3457.243 kb on + strand, within Dshi_3290 at 3457.243 kb on + strand, within Dshi_3290 at 3457.425 kb on - strand at 3457.517 kb on - strand, within Dshi_3291 at 3457.547 kb on + strand, within Dshi_3291 at 3457.600 kb on + strand, within Dshi_3291 at 3457.718 kb on - strand, within Dshi_3291 at 3457.878 kb on + strand, within Dshi_3291 at 3457.881 kb on + strand, within Dshi_3291 at 3457.953 kb on - strand, within Dshi_3291 at 3458.043 kb on - strand, within Dshi_3291 at 3458.079 kb on - strand, within Dshi_3291 at 3458.158 kb on - strand at 3458.168 kb on - strand at 3458.234 kb on - strand at 3458.252 kb on + strand at 3458.260 kb on - strand at 3458.330 kb on + strand at 3458.338 kb on - strand at 3458.471 kb on + strand, within Dshi_3292 at 3458.471 kb on + strand, within Dshi_3292 at 3458.540 kb on + strand, within Dshi_3292 at 3458.540 kb on + strand, within Dshi_3292 at 3458.548 kb on - strand, within Dshi_3292 at 3458.610 kb on + strand, within Dshi_3292 at 3458.646 kb on + strand, within Dshi_3292 at 3458.709 kb on + strand, within Dshi_3292 at 3458.888 kb on + strand, within Dshi_3292 at 3458.925 kb on + strand, within Dshi_3292 at 3458.961 kb on - strand, within Dshi_3292 at 3459.029 kb on - strand, within Dshi_3292 at 3459.112 kb on - strand at 3459.147 kb on - strand at 3459.170 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 3,456,803 + -1.2 3,457,052 - Dshi_3290 0.38 -1.6 3,457,241 + Dshi_3290 0.83 -3.2 3,457,243 + Dshi_3290 0.83 -0.1 3,457,243 + Dshi_3290 0.83 +1.0 3,457,425 - -1.3 3,457,517 - Dshi_3291 0.19 +0.3 3,457,547 + Dshi_3291 0.22 -1.6 3,457,600 + Dshi_3291 0.28 -2.9 3,457,718 - Dshi_3291 0.42 -3.8 3,457,878 + Dshi_3291 0.60 -2.2 3,457,881 + Dshi_3291 0.61 -2.6 3,457,953 - Dshi_3291 0.69 -3.3 3,458,043 - Dshi_3291 0.79 -2.1 3,458,079 - Dshi_3291 0.83 -0.4 3,458,158 - -1.2 3,458,168 - -2.9 3,458,234 - +0.6 3,458,252 + -1.2 3,458,260 - +1.4 3,458,330 + -0.1 3,458,338 - +1.4 3,458,471 + Dshi_3292 0.25 +0.1 3,458,471 + Dshi_3292 0.25 +0.5 3,458,540 + Dshi_3292 0.32 +0.3 3,458,540 + Dshi_3292 0.32 +0.2 3,458,548 - Dshi_3292 0.33 +0.2 3,458,610 + Dshi_3292 0.40 -1.2 3,458,646 + Dshi_3292 0.44 +1.9 3,458,709 + Dshi_3292 0.52 -1.1 3,458,888 + Dshi_3292 0.72 +0.3 3,458,925 + Dshi_3292 0.76 +0.9 3,458,961 - Dshi_3292 0.80 -2.7 3,459,029 - Dshi_3292 0.88 +0.3 3,459,112 - -0.2 3,459,147 - +0.2 3,459,170 + -0.4
Or see this region's nucleotide sequence