Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3281 and Dshi_3282 are separated by 311 nucleotides Dshi_3282 and Dshi_3283 overlap by 4 nucleotides Dshi_3283 and Dshi_3284 overlap by 4 nucleotides
Dshi_3281: Dshi_3281 - Endonuclease/exonuclease/phosphatase (RefSeq), at 3,445,107 to 3,448,478
_3281
Dshi_3282: Dshi_3282 - formate dehydrogenase subunit FdhD (RefSeq), at 3,448,790 to 3,449,674
_3282
Dshi_3283: Dshi_3283 - molybdopterin-guanine dinucleotide biosynthesis protein A (RefSeq), at 3,449,671 to 3,450,306
_3283
Dshi_3284: Dshi_3284 - molybdopterin-guanine dinucleotide biosynthesis protein B (RefSeq), at 3,450,303 to 3,452,075
_3284
Position (kb)
3448
3449
3450 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3447.857 kb on - strand, within Dshi_3281 at 3447.872 kb on - strand, within Dshi_3281 at 3447.873 kb on + strand, within Dshi_3281 at 3447.873 kb on + strand, within Dshi_3281 at 3447.881 kb on - strand, within Dshi_3281 at 3447.989 kb on - strand, within Dshi_3281 at 3448.060 kb on - strand, within Dshi_3281 at 3448.077 kb on + strand, within Dshi_3281 at 3448.096 kb on - strand, within Dshi_3281 at 3448.134 kb on - strand, within Dshi_3281 at 3448.146 kb on + strand at 3448.152 kb on - strand at 3448.186 kb on - strand at 3448.187 kb on - strand at 3448.190 kb on + strand at 3448.272 kb on + strand at 3448.272 kb on + strand at 3448.323 kb on - strand at 3448.368 kb on - strand at 3448.404 kb on + strand at 3448.412 kb on - strand at 3448.475 kb on + strand at 3448.483 kb on - strand at 3448.494 kb on + strand at 3448.523 kb on - strand at 3448.567 kb on + strand at 3448.575 kb on - strand at 3448.655 kb on + strand at 3448.730 kb on - strand at 3448.735 kb on + strand at 3448.735 kb on + strand at 3448.746 kb on + strand at 3448.783 kb on - strand at 3448.796 kb on + strand at 3448.804 kb on - strand at 3448.835 kb on - strand at 3448.882 kb on - strand, within Dshi_3282 at 3448.985 kb on - strand, within Dshi_3282 at 3449.023 kb on + strand at 3449.023 kb on + strand, within Dshi_3282 at 3449.053 kb on - strand, within Dshi_3282 at 3449.232 kb on + strand, within Dshi_3282 at 3449.267 kb on - strand, within Dshi_3282 at 3449.273 kb on - strand, within Dshi_3282 at 3449.328 kb on + strand, within Dshi_3282 at 3449.515 kb on - strand, within Dshi_3282 at 3449.658 kb on + strand at 3449.668 kb on + strand at 3449.695 kb on - strand at 3449.736 kb on + strand, within Dshi_3283 at 3450.030 kb on - strand, within Dshi_3283 at 3450.148 kb on + strand, within Dshi_3283 at 3450.185 kb on - strand, within Dshi_3283 at 3450.185 kb on - strand, within Dshi_3283 at 3450.227 kb on + strand, within Dshi_3283 at 3450.254 kb on + strand at 3450.571 kb on + strand, within Dshi_3284
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 3,447,857 - Dshi_3281 0.82 +1.5 3,447,872 - Dshi_3281 0.82 +0.5 3,447,873 + Dshi_3281 0.82 +0.0 3,447,873 + Dshi_3281 0.82 -1.1 3,447,881 - Dshi_3281 0.82 +0.1 3,447,989 - Dshi_3281 0.85 +0.3 3,448,060 - Dshi_3281 0.88 +0.2 3,448,077 + Dshi_3281 0.88 +0.0 3,448,096 - Dshi_3281 0.89 -1.6 3,448,134 - Dshi_3281 0.90 -1.6 3,448,146 + +1.1 3,448,152 - +0.4 3,448,186 - -0.8 3,448,187 - -0.8 3,448,190 + -1.8 3,448,272 + -0.2 3,448,272 + +1.3 3,448,323 - -0.2 3,448,368 - -0.6 3,448,404 + +1.2 3,448,412 - -0.4 3,448,475 + +0.5 3,448,483 - -0.3 3,448,494 + -2.3 3,448,523 - -1.8 3,448,567 + -0.0 3,448,575 - +0.0 3,448,655 + +0.4 3,448,730 - +0.6 3,448,735 + -0.5 3,448,735 + +0.4 3,448,746 + +0.3 3,448,783 - -0.4 3,448,796 + -0.1 3,448,804 - +0.6 3,448,835 - -0.4 3,448,882 - Dshi_3282 0.10 -2.5 3,448,985 - Dshi_3282 0.22 +0.9 3,449,023 + +2.0 3,449,023 + Dshi_3282 0.26 +0.3 3,449,053 - Dshi_3282 0.30 +0.3 3,449,232 + Dshi_3282 0.50 +0.0 3,449,267 - Dshi_3282 0.54 -0.6 3,449,273 - Dshi_3282 0.55 -0.6 3,449,328 + Dshi_3282 0.61 -0.2 3,449,515 - Dshi_3282 0.82 +0.5 3,449,658 + +1.0 3,449,668 + +0.9 3,449,695 - +0.4 3,449,736 + Dshi_3283 0.10 +0.5 3,450,030 - Dshi_3283 0.56 +0.0 3,450,148 + Dshi_3283 0.75 +0.5 3,450,185 - Dshi_3283 0.81 +1.9 3,450,185 - Dshi_3283 0.81 +0.8 3,450,227 + Dshi_3283 0.87 -1.3 3,450,254 + -0.2 3,450,571 + Dshi_3284 0.15 +0.1
Or see this region's nucleotide sequence