Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3113 and Dshi_3114 are separated by 11 nucleotides Dshi_3114 and Dshi_3115 overlap by 4 nucleotides Dshi_3115 and Dshi_3116 overlap by 4 nucleotides Dshi_3116 and Dshi_3117 overlap by 4 nucleotides
Dshi_3113: Dshi_3113 - ATPase associated with various cellular activities AAA_3 (RefSeq), at 3,280,195 to 3,281,160
_3113
Dshi_3114: Dshi_3114 - protein of unknown function DUF58 (RefSeq), at 3,281,172 to 3,282,107
_3114
Dshi_3115: Dshi_3115 - hypothetical protein (RefSeq), at 3,282,104 to 3,282,577
_3115
Dshi_3116: Dshi_3116 - von Willebrand factor type A (RefSeq), at 3,282,574 to 3,283,560
_3116
Dshi_3117: Dshi_3117 - Tetratricopeptide TPR_2 repeat protein (RefSeq), at 3,283,557 to 3,285,068
_3117
Position (kb)
3282
3283 Strain fitness (log2 ratio)
-2
-1
0
1 at 3281.106 kb on - strand at 3281.112 kb on + strand at 3281.189 kb on - strand at 3281.200 kb on + strand at 3281.288 kb on + strand, within Dshi_3114 at 3281.350 kb on - strand, within Dshi_3114 at 3281.385 kb on + strand, within Dshi_3114 at 3281.406 kb on + strand, within Dshi_3114 at 3281.406 kb on + strand, within Dshi_3114 at 3281.450 kb on + strand, within Dshi_3114 at 3281.451 kb on - strand, within Dshi_3114 at 3281.477 kb on + strand, within Dshi_3114 at 3281.498 kb on - strand, within Dshi_3114 at 3281.676 kb on - strand, within Dshi_3114 at 3281.699 kb on + strand, within Dshi_3114 at 3281.770 kb on - strand, within Dshi_3114 at 3281.884 kb on + strand, within Dshi_3114 at 3281.899 kb on - strand, within Dshi_3114 at 3281.972 kb on - strand, within Dshi_3114 at 3282.173 kb on + strand, within Dshi_3115 at 3282.274 kb on - strand, within Dshi_3115 at 3282.487 kb on - strand, within Dshi_3115 at 3282.549 kb on - strand at 3282.579 kb on - strand at 3282.780 kb on + strand, within Dshi_3116 at 3282.783 kb on - strand, within Dshi_3116 at 3282.949 kb on + strand, within Dshi_3116 at 3283.038 kb on - strand, within Dshi_3116 at 3283.074 kb on + strand, within Dshi_3116 at 3283.084 kb on + strand, within Dshi_3116 at 3283.127 kb on + strand, within Dshi_3116 at 3283.200 kb on + strand, within Dshi_3116 at 3283.222 kb on + strand, within Dshi_3116 at 3283.368 kb on - strand, within Dshi_3116 at 3283.532 kb on - strand at 3283.573 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 3,281,106 - -1.4 3,281,112 + +0.8 3,281,189 - -0.7 3,281,200 + +0.5 3,281,288 + Dshi_3114 0.12 -1.2 3,281,350 - Dshi_3114 0.19 -1.5 3,281,385 + Dshi_3114 0.23 +0.3 3,281,406 + Dshi_3114 0.25 +1.1 3,281,406 + Dshi_3114 0.25 -1.8 3,281,450 + Dshi_3114 0.30 -0.1 3,281,451 - Dshi_3114 0.30 -0.1 3,281,477 + Dshi_3114 0.33 +0.5 3,281,498 - Dshi_3114 0.35 +0.9 3,281,676 - Dshi_3114 0.54 -0.0 3,281,699 + Dshi_3114 0.56 +0.4 3,281,770 - Dshi_3114 0.64 +0.9 3,281,884 + Dshi_3114 0.76 +1.1 3,281,899 - Dshi_3114 0.78 +0.4 3,281,972 - Dshi_3114 0.85 +1.3 3,282,173 + Dshi_3115 0.15 -0.9 3,282,274 - Dshi_3115 0.36 -1.0 3,282,487 - Dshi_3115 0.81 -0.2 3,282,549 - +0.8 3,282,579 - -0.4 3,282,780 + Dshi_3116 0.21 -0.6 3,282,783 - Dshi_3116 0.21 +0.7 3,282,949 + Dshi_3116 0.38 -0.6 3,283,038 - Dshi_3116 0.47 +0.6 3,283,074 + Dshi_3116 0.51 -0.3 3,283,084 + Dshi_3116 0.52 +0.2 3,283,127 + Dshi_3116 0.56 -0.5 3,283,200 + Dshi_3116 0.63 +0.7 3,283,222 + Dshi_3116 0.66 -0.1 3,283,368 - Dshi_3116 0.80 -0.4 3,283,532 - +0.1 3,283,573 - +0.6
Or see this region's nucleotide sequence