Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2963 and Dshi_2964 are separated by 92 nucleotides Dshi_2964 and Dshi_2965 are separated by 84 nucleotides Dshi_2965 and Dshi_2966 are separated by 168 nucleotides
Dshi_2963: Dshi_2963 - inner-membrane translocator (RefSeq), at 3,129,327 to 3,130,253
_2963
Dshi_2964: Dshi_2964 - basic membrane lipoprotein (RefSeq), at 3,130,346 to 3,131,509
_2964
Dshi_2965: Dshi_2965 - hypothetical protein (RefSeq), at 3,131,594 to 3,131,788
_2965
Dshi_2966: Dshi_2966 - 3-methyl-2-oxobutanoate hydroxymethyltransferase (RefSeq), at 3,131,957 to 3,132,778
_2966
Position (kb)
3130
3131
3132 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3129.366 kb on + strand at 3129.567 kb on + strand at 3129.697 kb on + strand, within Dshi_2963 at 3129.713 kb on + strand, within Dshi_2963 at 3129.767 kb on - strand, within Dshi_2963 at 3129.788 kb on + strand, within Dshi_2963 at 3129.793 kb on + strand, within Dshi_2963 at 3129.801 kb on - strand, within Dshi_2963 at 3129.819 kb on + strand, within Dshi_2963 at 3129.827 kb on - strand, within Dshi_2963 at 3129.828 kb on - strand, within Dshi_2963 at 3129.879 kb on - strand, within Dshi_2963 at 3129.929 kb on + strand, within Dshi_2963 at 3129.977 kb on + strand, within Dshi_2963 at 3129.985 kb on - strand, within Dshi_2963 at 3130.057 kb on + strand, within Dshi_2963 at 3130.060 kb on + strand, within Dshi_2963 at 3130.152 kb on - strand, within Dshi_2963 at 3130.247 kb on + strand at 3130.359 kb on - strand at 3130.408 kb on - strand at 3130.495 kb on + strand, within Dshi_2964 at 3130.583 kb on + strand, within Dshi_2964 at 3130.664 kb on + strand, within Dshi_2964 at 3130.738 kb on + strand, within Dshi_2964 at 3130.813 kb on + strand, within Dshi_2964 at 3130.969 kb on - strand, within Dshi_2964 at 3131.369 kb on + strand, within Dshi_2964 at 3131.380 kb on + strand, within Dshi_2964 at 3131.381 kb on + strand, within Dshi_2964 at 3131.470 kb on + strand at 3131.570 kb on + strand at 3131.616 kb on + strand, within Dshi_2965 at 3131.634 kb on + strand, within Dshi_2965 at 3131.651 kb on - strand, within Dshi_2965 at 3131.747 kb on + strand, within Dshi_2965 at 3131.798 kb on - strand at 3131.846 kb on - strand at 3131.846 kb on - strand at 3131.915 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 3,129,366 + +0.0 3,129,567 + +1.0 3,129,697 + Dshi_2963 0.40 -0.1 3,129,713 + Dshi_2963 0.42 +0.0 3,129,767 - Dshi_2963 0.47 +0.8 3,129,788 + Dshi_2963 0.50 -0.7 3,129,793 + Dshi_2963 0.50 -1.0 3,129,801 - Dshi_2963 0.51 -1.0 3,129,819 + Dshi_2963 0.53 +0.5 3,129,827 - Dshi_2963 0.54 -1.6 3,129,828 - Dshi_2963 0.54 -2.7 3,129,879 - Dshi_2963 0.60 -0.6 3,129,929 + Dshi_2963 0.65 -1.2 3,129,977 + Dshi_2963 0.70 -0.4 3,129,985 - Dshi_2963 0.71 +0.5 3,130,057 + Dshi_2963 0.79 -3.0 3,130,060 + Dshi_2963 0.79 +0.2 3,130,152 - Dshi_2963 0.89 +0.2 3,130,247 + +0.6 3,130,359 - +0.2 3,130,408 - +2.3 3,130,495 + Dshi_2964 0.13 +0.1 3,130,583 + Dshi_2964 0.20 +0.3 3,130,664 + Dshi_2964 0.27 -0.4 3,130,738 + Dshi_2964 0.34 +0.8 3,130,813 + Dshi_2964 0.40 -1.0 3,130,969 - Dshi_2964 0.54 -0.0 3,131,369 + Dshi_2964 0.88 -1.0 3,131,380 + Dshi_2964 0.89 +0.2 3,131,381 + Dshi_2964 0.89 -0.2 3,131,470 + +1.5 3,131,570 + -0.6 3,131,616 + Dshi_2965 0.11 +0.1 3,131,634 + Dshi_2965 0.21 -0.4 3,131,651 - Dshi_2965 0.29 -2.0 3,131,747 + Dshi_2965 0.78 -0.3 3,131,798 - -0.5 3,131,846 - -0.7 3,131,846 - -0.3 3,131,915 + +0.1
Or see this region's nucleotide sequence