Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2940
Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | m.b. Thallium(I) acetate 0.004 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 3,097,752 | - | Dshi_2939 | 0.61 | +0.3 | |
| 3,097,779 | - | Dshi_2939 | 0.62 | +0.3 | |
| 3,097,975 | + | Dshi_2939 | 0.71 | +0.0 | |
| 3,098,051 | + | Dshi_2939 | 0.74 | +1.0 | |
| 3,098,091 | - | Dshi_2939 | 0.76 | -0.2 | |
| 3,099,207 | + | Dshi_2940 | 0.26 | -1.3 | |
| 3,099,215 | - | Dshi_2940 | 0.26 | -1.5 | |
| 3,099,231 | + | Dshi_2940 | 0.27 | -3.0 | |
| 3,099,341 | + | Dshi_2940 | 0.33 | -3.3 | |
| 3,099,652 | - | Dshi_2940 | 0.49 | -1.0 | |
| 3,099,862 | + | Dshi_2940 | 0.59 | -3.4 | |
| 3,100,160 | + | Dshi_2940 | 0.75 | -0.8 | |
| 3,100,324 | - | Dshi_2940 | 0.83 | -4.0 | |
| 3,100,734 | - | -1.5 | |||
| 3,101,119 | + | Dshi_2941 | 0.36 | -1.5 |
Or see this region's nucleotide sequence