Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2849
Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Thallium(I) acetate 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,005,802 | + | Dshi_2848 | 0.38 | +1.6 | |
3,006,045 | - | Dshi_2848 | 0.70 | +2.3 | |
3,006,062 | - | Dshi_2848 | 0.72 | +0.9 | |
3,006,140 | + | Dshi_2848 | 0.82 | +0.6 | |
3,006,172 | + | Dshi_2848 | 0.86 | +1.0 | |
3,006,333 | + | +1.6 | |||
3,006,402 | + | -1.6 | |||
3,006,472 | - | +0.7 | |||
3,006,621 | + | Dshi_2849 | 0.29 | -1.1 | |
3,006,675 | - | Dshi_2849 | 0.37 | +0.0 | |
3,006,890 | + | Dshi_2849 | 0.66 | -0.2 | |
3,007,024 | - | Dshi_2849 | 0.84 | -1.0 | |
3,007,218 | + | +0.0 | |||
3,007,297 | - | Dshi_2850 | 0.11 | +0.7 | |
3,007,353 | + | Dshi_2850 | 0.14 | +0.7 | |
3,007,377 | + | Dshi_2850 | 0.16 | +1.0 | |
3,007,400 | + | Dshi_2850 | 0.17 | +0.2 | |
3,007,408 | - | Dshi_2850 | 0.18 | +0.3 | |
3,007,438 | + | Dshi_2850 | 0.20 | +0.5 | |
3,007,582 | + | Dshi_2850 | 0.29 | +1.1 | |
3,007,582 | + | Dshi_2850 | 0.29 | +0.3 | |
3,007,582 | + | Dshi_2850 | 0.29 | +1.1 | |
3,007,590 | - | Dshi_2850 | 0.30 | +0.3 | |
3,007,704 | - | Dshi_2850 | 0.37 | -0.7 | |
3,007,929 | + | Dshi_2850 | 0.52 | +0.3 | |
3,007,970 | - | Dshi_2850 | 0.54 | -2.8 | |
3,007,976 | + | Dshi_2850 | 0.55 | +0.2 | |
3,008,021 | + | +2.0 | |||
3,008,101 | - | Dshi_2850 | 0.63 | +0.5 |
Or see this region's nucleotide sequence