Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2770 and Dshi_2771 are separated by 137 nucleotides Dshi_2771 and Dshi_2772 are separated by 146 nucleotides Dshi_2772 and Dshi_2773 overlap by 4 nucleotides
Dshi_2770: Dshi_2770 - magnesium transporter (RefSeq), at 2,931,759 to 2,933,141
_2770
Dshi_2771: Dshi_2771 - Guanine deaminase (RefSeq), at 2,933,279 to 2,934,565
_2771
Dshi_2772: Dshi_2772 - SCP-like extracellular (RefSeq), at 2,934,712 to 2,935,170
_2772
Dshi_2773: Dshi_2773 - amidohydrolase (RefSeq), at 2,935,167 to 2,936,507
_2773
Position (kb)
2933
2934
2935 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2932.732 kb on + strand, within Dshi_2770 at 2933.043 kb on + strand at 2933.106 kb on + strand at 2933.146 kb on + strand at 2933.173 kb on + strand at 2933.263 kb on + strand at 2933.263 kb on + strand at 2933.263 kb on + strand at 2933.271 kb on - strand at 2933.271 kb on - strand at 2933.271 kb on - strand at 2933.271 kb on - strand at 2933.337 kb on + strand at 2933.356 kb on - strand at 2933.499 kb on + strand, within Dshi_2771 at 2933.576 kb on - strand, within Dshi_2771 at 2933.669 kb on + strand, within Dshi_2771 at 2933.810 kb on + strand, within Dshi_2771 at 2933.889 kb on + strand, within Dshi_2771 at 2933.952 kb on + strand, within Dshi_2771 at 2933.960 kb on - strand, within Dshi_2771 at 2933.978 kb on - strand, within Dshi_2771 at 2934.000 kb on - strand, within Dshi_2771 at 2934.005 kb on - strand, within Dshi_2771 at 2934.040 kb on - strand, within Dshi_2771 at 2934.097 kb on - strand, within Dshi_2771 at 2934.116 kb on - strand, within Dshi_2771 at 2934.137 kb on + strand, within Dshi_2771 at 2934.137 kb on + strand, within Dshi_2771 at 2934.163 kb on - strand, within Dshi_2771 at 2934.182 kb on - strand, within Dshi_2771 at 2934.182 kb on - strand, within Dshi_2771 at 2934.216 kb on + strand, within Dshi_2771 at 2934.265 kb on + strand, within Dshi_2771 at 2934.278 kb on - strand, within Dshi_2771 at 2934.311 kb on + strand, within Dshi_2771 at 2934.313 kb on + strand, within Dshi_2771 at 2934.433 kb on + strand, within Dshi_2771 at 2934.556 kb on + strand at 2934.609 kb on - strand at 2934.688 kb on + strand at 2934.727 kb on - strand at 2934.780 kb on + strand, within Dshi_2772 at 2934.921 kb on + strand, within Dshi_2772 at 2934.990 kb on - strand, within Dshi_2772 at 2934.990 kb on - strand, within Dshi_2772 at 2935.338 kb on + strand, within Dshi_2773 at 2935.368 kb on - strand, within Dshi_2773
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 2,932,732 + Dshi_2770 0.70 +0.4 2,933,043 + -0.6 2,933,106 + +1.3 2,933,146 + +0.7 2,933,173 + -0.6 2,933,263 + +0.7 2,933,263 + -2.0 2,933,263 + +1.8 2,933,271 - -0.8 2,933,271 - +0.4 2,933,271 - +1.5 2,933,271 - +0.2 2,933,337 + -1.2 2,933,356 - +0.3 2,933,499 + Dshi_2771 0.17 +1.0 2,933,576 - Dshi_2771 0.23 +0.6 2,933,669 + Dshi_2771 0.30 +1.0 2,933,810 + Dshi_2771 0.41 -1.5 2,933,889 + Dshi_2771 0.47 -1.1 2,933,952 + Dshi_2771 0.52 +0.0 2,933,960 - Dshi_2771 0.53 -1.3 2,933,978 - Dshi_2771 0.54 +0.5 2,934,000 - Dshi_2771 0.56 +0.5 2,934,005 - Dshi_2771 0.56 +1.0 2,934,040 - Dshi_2771 0.59 +0.2 2,934,097 - Dshi_2771 0.64 -0.1 2,934,116 - Dshi_2771 0.65 +0.2 2,934,137 + Dshi_2771 0.67 +0.9 2,934,137 + Dshi_2771 0.67 -0.0 2,934,163 - Dshi_2771 0.69 +1.2 2,934,182 - Dshi_2771 0.70 +0.5 2,934,182 - Dshi_2771 0.70 -0.2 2,934,216 + Dshi_2771 0.73 -1.1 2,934,265 + Dshi_2771 0.77 -0.1 2,934,278 - Dshi_2771 0.78 +0.4 2,934,311 + Dshi_2771 0.80 +0.0 2,934,313 + Dshi_2771 0.80 +0.4 2,934,433 + Dshi_2771 0.90 -1.5 2,934,556 + +0.3 2,934,609 - -2.3 2,934,688 + -0.8 2,934,727 - +0.4 2,934,780 + Dshi_2772 0.15 +0.4 2,934,921 + Dshi_2772 0.46 -0.9 2,934,990 - Dshi_2772 0.61 -0.4 2,934,990 - Dshi_2772 0.61 -2.5 2,935,338 + Dshi_2773 0.13 +0.5 2,935,368 - Dshi_2773 0.15 -0.4
Or see this region's nucleotide sequence