Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2768 and Dshi_2769 are separated by 42 nucleotides Dshi_2769 and Dshi_2770 overlap by 4 nucleotides Dshi_2770 and Dshi_2771 are separated by 137 nucleotides
Dshi_2768: Dshi_2768 - hypothetical protein (RefSeq), at 2,930,293 to 2,931,126
_2768
Dshi_2769: Dshi_2769 - 5-formyltetrahydrofolate cyclo-ligase (RefSeq), at 2,931,169 to 2,931,762
_2769
Dshi_2770: Dshi_2770 - magnesium transporter (RefSeq), at 2,931,759 to 2,933,141
_2770
Dshi_2771: Dshi_2771 - Guanine deaminase (RefSeq), at 2,933,279 to 2,934,565
_2771
Position (kb)
2931
2932
2933
2934 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2930.792 kb on - strand, within Dshi_2768 at 2930.824 kb on - strand, within Dshi_2768 at 2930.831 kb on + strand, within Dshi_2768 at 2931.117 kb on + strand at 2931.120 kb on - strand at 2931.125 kb on - strand at 2931.137 kb on - strand at 2931.143 kb on - strand at 2931.143 kb on - strand at 2931.143 kb on - strand at 2931.164 kb on - strand at 2931.174 kb on + strand at 2931.193 kb on - strand at 2931.262 kb on + strand, within Dshi_2769 at 2931.270 kb on + strand, within Dshi_2769 at 2931.275 kb on + strand, within Dshi_2769 at 2931.280 kb on + strand, within Dshi_2769 at 2931.311 kb on - strand, within Dshi_2769 at 2931.384 kb on + strand, within Dshi_2769 at 2931.704 kb on - strand at 2931.742 kb on + strand at 2932.732 kb on + strand, within Dshi_2770 at 2933.043 kb on + strand at 2933.106 kb on + strand at 2933.146 kb on + strand at 2933.173 kb on + strand at 2933.263 kb on + strand at 2933.263 kb on + strand at 2933.263 kb on + strand at 2933.271 kb on - strand at 2933.271 kb on - strand at 2933.271 kb on - strand at 2933.271 kb on - strand at 2933.337 kb on + strand at 2933.356 kb on - strand at 2933.499 kb on + strand, within Dshi_2771 at 2933.576 kb on - strand, within Dshi_2771 at 2933.669 kb on + strand, within Dshi_2771 at 2933.810 kb on + strand, within Dshi_2771 at 2933.889 kb on + strand, within Dshi_2771 at 2933.952 kb on + strand, within Dshi_2771 at 2933.960 kb on - strand, within Dshi_2771 at 2933.978 kb on - strand, within Dshi_2771 at 2934.000 kb on - strand, within Dshi_2771 at 2934.005 kb on - strand, within Dshi_2771 at 2934.040 kb on - strand, within Dshi_2771 at 2934.097 kb on - strand, within Dshi_2771 at 2934.116 kb on - strand, within Dshi_2771 at 2934.137 kb on + strand, within Dshi_2771 at 2934.137 kb on + strand, within Dshi_2771
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 2,930,792 - Dshi_2768 0.60 -3.5 2,930,824 - Dshi_2768 0.64 -3.8 2,930,831 + Dshi_2768 0.65 -3.2 2,931,117 + -2.8 2,931,120 - -3.0 2,931,125 - -1.4 2,931,137 - -0.3 2,931,143 - -1.8 2,931,143 - -2.3 2,931,143 - -1.3 2,931,164 - -0.6 2,931,174 + -0.1 2,931,193 - +1.0 2,931,262 + Dshi_2769 0.16 -0.9 2,931,270 + Dshi_2769 0.17 -0.6 2,931,275 + Dshi_2769 0.18 -1.0 2,931,280 + Dshi_2769 0.19 -1.7 2,931,311 - Dshi_2769 0.24 -2.9 2,931,384 + Dshi_2769 0.36 -1.0 2,931,704 - -0.7 2,931,742 + -0.2 2,932,732 + Dshi_2770 0.70 +0.4 2,933,043 + -0.6 2,933,106 + +1.3 2,933,146 + +0.7 2,933,173 + -0.6 2,933,263 + +0.7 2,933,263 + -2.0 2,933,263 + +1.8 2,933,271 - -0.8 2,933,271 - +0.4 2,933,271 - +1.5 2,933,271 - +0.2 2,933,337 + -1.2 2,933,356 - +0.3 2,933,499 + Dshi_2771 0.17 +1.0 2,933,576 - Dshi_2771 0.23 +0.6 2,933,669 + Dshi_2771 0.30 +1.0 2,933,810 + Dshi_2771 0.41 -1.5 2,933,889 + Dshi_2771 0.47 -1.1 2,933,952 + Dshi_2771 0.52 +0.0 2,933,960 - Dshi_2771 0.53 -1.3 2,933,978 - Dshi_2771 0.54 +0.5 2,934,000 - Dshi_2771 0.56 +0.5 2,934,005 - Dshi_2771 0.56 +1.0 2,934,040 - Dshi_2771 0.59 +0.2 2,934,097 - Dshi_2771 0.64 -0.1 2,934,116 - Dshi_2771 0.65 +0.2 2,934,137 + Dshi_2771 0.67 +0.9 2,934,137 + Dshi_2771 0.67 -0.0
Or see this region's nucleotide sequence