Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2766 and Dshi_2767 overlap by 4 nucleotides Dshi_2767 and Dshi_2768 overlap by 4 nucleotides Dshi_2768 and Dshi_2769 are separated by 42 nucleotides Dshi_2769 and Dshi_2770 overlap by 4 nucleotides
Dshi_2766: Dshi_2766 - TrkA-C domain protein (RefSeq), at 2,927,535 to 2,929,334
_2766
Dshi_2767: Dshi_2767 - protein of unknown function DUF6 transmembrane (RefSeq), at 2,929,331 to 2,930,296
_2767
Dshi_2768: Dshi_2768 - hypothetical protein (RefSeq), at 2,930,293 to 2,931,126
_2768
Dshi_2769: Dshi_2769 - 5-formyltetrahydrofolate cyclo-ligase (RefSeq), at 2,931,169 to 2,931,762
_2769
Dshi_2770: Dshi_2770 - magnesium transporter (RefSeq), at 2,931,759 to 2,933,141
_2770
Position (kb)
2930
2931
2932 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2929.344 kb on + strand at 2929.355 kb on + strand at 2929.363 kb on - strand at 2929.439 kb on + strand, within Dshi_2767 at 2929.446 kb on - strand, within Dshi_2767 at 2929.469 kb on + strand, within Dshi_2767 at 2929.512 kb on + strand, within Dshi_2767 at 2929.520 kb on - strand, within Dshi_2767 at 2929.562 kb on + strand, within Dshi_2767 at 2929.579 kb on + strand, within Dshi_2767 at 2929.658 kb on + strand, within Dshi_2767 at 2929.661 kb on - strand, within Dshi_2767 at 2929.683 kb on + strand, within Dshi_2767 at 2929.753 kb on + strand, within Dshi_2767 at 2929.762 kb on - strand, within Dshi_2767 at 2929.793 kb on - strand, within Dshi_2767 at 2929.902 kb on - strand, within Dshi_2767 at 2929.980 kb on + strand, within Dshi_2767 at 2930.118 kb on + strand, within Dshi_2767 at 2930.437 kb on + strand, within Dshi_2768 at 2930.687 kb on - strand, within Dshi_2768 at 2930.696 kb on - strand, within Dshi_2768 at 2930.792 kb on - strand, within Dshi_2768 at 2930.824 kb on - strand, within Dshi_2768 at 2930.831 kb on + strand, within Dshi_2768 at 2931.117 kb on + strand at 2931.120 kb on - strand at 2931.125 kb on - strand at 2931.137 kb on - strand at 2931.143 kb on - strand at 2931.143 kb on - strand at 2931.143 kb on - strand at 2931.164 kb on - strand at 2931.174 kb on + strand at 2931.193 kb on - strand at 2931.262 kb on + strand, within Dshi_2769 at 2931.270 kb on + strand, within Dshi_2769 at 2931.275 kb on + strand, within Dshi_2769 at 2931.280 kb on + strand, within Dshi_2769 at 2931.311 kb on - strand, within Dshi_2769 at 2931.384 kb on + strand, within Dshi_2769 at 2931.704 kb on - strand at 2931.742 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 2,929,344 + -0.3 2,929,355 + +0.5 2,929,363 - +0.4 2,929,439 + Dshi_2767 0.11 +0.2 2,929,446 - Dshi_2767 0.12 -0.0 2,929,469 + Dshi_2767 0.14 +1.9 2,929,512 + Dshi_2767 0.19 -0.3 2,929,520 - Dshi_2767 0.20 -0.8 2,929,562 + Dshi_2767 0.24 -1.2 2,929,579 + Dshi_2767 0.26 -0.5 2,929,658 + Dshi_2767 0.34 -0.5 2,929,661 - Dshi_2767 0.34 -0.1 2,929,683 + Dshi_2767 0.36 +0.3 2,929,753 + Dshi_2767 0.44 -0.9 2,929,762 - Dshi_2767 0.45 -0.4 2,929,793 - Dshi_2767 0.48 -0.3 2,929,902 - Dshi_2767 0.59 +1.2 2,929,980 + Dshi_2767 0.67 -0.4 2,930,118 + Dshi_2767 0.81 +0.3 2,930,437 + Dshi_2768 0.17 -3.0 2,930,687 - Dshi_2768 0.47 -2.3 2,930,696 - Dshi_2768 0.48 -2.0 2,930,792 - Dshi_2768 0.60 -3.5 2,930,824 - Dshi_2768 0.64 -3.8 2,930,831 + Dshi_2768 0.65 -3.2 2,931,117 + -2.8 2,931,120 - -3.0 2,931,125 - -1.4 2,931,137 - -0.3 2,931,143 - -1.8 2,931,143 - -2.3 2,931,143 - -1.3 2,931,164 - -0.6 2,931,174 + -0.1 2,931,193 - +1.0 2,931,262 + Dshi_2769 0.16 -0.9 2,931,270 + Dshi_2769 0.17 -0.6 2,931,275 + Dshi_2769 0.18 -1.0 2,931,280 + Dshi_2769 0.19 -1.7 2,931,311 - Dshi_2769 0.24 -2.9 2,931,384 + Dshi_2769 0.36 -1.0 2,931,704 - -0.7 2,931,742 + -0.2
Or see this region's nucleotide sequence