Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2742 and Dshi_2743 are separated by 200 nucleotides Dshi_2743 and Dshi_2744 are separated by 191 nucleotides Dshi_2744 and Dshi_2745 are separated by 60 nucleotides Dshi_2745 and Dshi_2746 are separated by 31 nucleotides
Dshi_2742: Dshi_2742 - Adenylosuccinate synthase (RefSeq), at 2,903,816 to 2,905,111
_2742
Dshi_2743: Dshi_2743 - preprotein translocase, SecG subunit (RefSeq), at 2,905,312 to 2,905,680
_2743
Dshi_2744: Dshi_2744 - CTP synthase (RefSeq), at 2,905,872 to 2,907,515
_2744
Dshi_2745: Dshi_2745 - phenazine biosynthesis protein PhzF family (RefSeq), at 2,907,576 to 2,908,436
_2745
Dshi_2746: Dshi_2746 - hypothetical protein (RefSeq), at 2,908,468 to 2,908,728
_2746
Position (kb)
2905
2906
2907
2908 Strain fitness (log2 ratio)
-1
0
1 at 2905.235 kb on + strand at 2907.610 kb on + strand at 2907.677 kb on + strand, within Dshi_2745 at 2907.824 kb on + strand, within Dshi_2745 at 2907.921 kb on - strand, within Dshi_2745 at 2907.935 kb on - strand, within Dshi_2745 at 2907.939 kb on + strand, within Dshi_2745 at 2908.113 kb on + strand, within Dshi_2745 at 2908.397 kb on + strand at 2908.466 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 2,905,235 + +0.2 2,907,610 + +0.3 2,907,677 + Dshi_2745 0.12 +0.3 2,907,824 + Dshi_2745 0.29 -0.1 2,907,921 - Dshi_2745 0.40 +1.4 2,907,935 - Dshi_2745 0.42 -1.3 2,907,939 + Dshi_2745 0.42 +0.3 2,908,113 + Dshi_2745 0.62 +1.3 2,908,397 + -0.1 2,908,466 + +0.6
Or see this region's nucleotide sequence