Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2730 and Dshi_2731 overlap by 1 nucleotides Dshi_2731 and Dshi_2732 are separated by 71 nucleotides Dshi_2732 and Dshi_2733 are separated by 112 nucleotides Dshi_2733 and Dshi_2734 are separated by 164 nucleotides Dshi_2734 and Dshi_2735 overlap by 1 nucleotides
Dshi_2730: Dshi_2730 - FG-GAP repeat domain protein (RefSeq), at 2,892,698 to 2,893,456
_2730
Dshi_2731: Dshi_2731 - ferredoxin (RefSeq), at 2,893,456 to 2,893,779
_2731
Dshi_2732: Dshi_2732 - nucleic acid binding OB-fold tRNA/helicase-type (RefSeq), at 2,893,851 to 2,894,264
_2732
Dshi_2733: Dshi_2733 - protease Do (RefSeq), at 2,894,377 to 2,895,882
_2733
Dshi_2734: Dshi_2734 - hypothetical protein (RefSeq), at 2,896,047 to 2,896,241
_2734
Dshi_2735: Dshi_2735 - HflC protein (RefSeq), at 2,896,241 to 2,897,134
_2735
Position (kb)
2894
2895
2896 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2893.955 kb on - strand, within Dshi_2732 at 2894.150 kb on + strand, within Dshi_2732 at 2894.253 kb on + strand at 2894.297 kb on - strand at 2894.564 kb on - strand, within Dshi_2733 at 2894.688 kb on - strand, within Dshi_2733 at 2894.760 kb on - strand, within Dshi_2733 at 2894.785 kb on + strand, within Dshi_2733 at 2894.792 kb on + strand, within Dshi_2733 at 2894.837 kb on - strand at 2894.954 kb on - strand, within Dshi_2733 at 2895.133 kb on - strand at 2895.318 kb on - strand, within Dshi_2733 at 2895.330 kb on + strand, within Dshi_2733 at 2895.454 kb on - strand, within Dshi_2733 at 2895.455 kb on + strand, within Dshi_2733 at 2895.546 kb on - strand, within Dshi_2733 at 2895.676 kb on - strand, within Dshi_2733 at 2895.845 kb on + strand at 2895.882 kb on + strand at 2895.882 kb on + strand at 2895.884 kb on + strand at 2896.018 kb on - strand at 2896.077 kb on + strand, within Dshi_2734 at 2896.133 kb on - strand, within Dshi_2734 at 2896.426 kb on - strand, within Dshi_2735 at 2896.438 kb on + strand, within Dshi_2735 at 2896.440 kb on + strand, within Dshi_2735 at 2896.533 kb on - strand, within Dshi_2735 at 2896.670 kb on + strand, within Dshi_2735 at 2896.704 kb on - strand, within Dshi_2735 at 2896.759 kb on - strand, within Dshi_2735
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 2,893,955 - Dshi_2732 0.25 +0.0 2,894,150 + Dshi_2732 0.72 +0.3 2,894,253 + +0.1 2,894,297 - +0.2 2,894,564 - Dshi_2733 0.12 +0.2 2,894,688 - Dshi_2733 0.21 +1.6 2,894,760 - Dshi_2733 0.25 -1.0 2,894,785 + Dshi_2733 0.27 -1.0 2,894,792 + Dshi_2733 0.28 -0.7 2,894,837 - -2.3 2,894,954 - Dshi_2733 0.38 -0.6 2,895,133 - -0.4 2,895,318 - Dshi_2733 0.62 -3.6 2,895,330 + Dshi_2733 0.63 -1.7 2,895,454 - Dshi_2733 0.72 -0.4 2,895,455 + Dshi_2733 0.72 -1.3 2,895,546 - Dshi_2733 0.78 -1.6 2,895,676 - Dshi_2733 0.86 -1.6 2,895,845 + -0.3 2,895,882 + -1.2 2,895,882 + -1.2 2,895,884 + -0.4 2,896,018 - -0.5 2,896,077 + Dshi_2734 0.15 -0.7 2,896,133 - Dshi_2734 0.44 -0.4 2,896,426 - Dshi_2735 0.21 +0.5 2,896,438 + Dshi_2735 0.22 +0.7 2,896,440 + Dshi_2735 0.22 +0.7 2,896,533 - Dshi_2735 0.33 +1.7 2,896,670 + Dshi_2735 0.48 +3.7 2,896,704 - Dshi_2735 0.52 +0.8 2,896,759 - Dshi_2735 0.58 +1.3
Or see this region's nucleotide sequence