Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2728
Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Thallium(I) acetate 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,890,401 | + | +1.2 | |||
2,890,401 | + | +0.3 | |||
2,890,409 | - | -0.6 | |||
2,890,409 | - | -1.9 | |||
2,890,736 | + | Dshi_2728 | 0.23 | -0.2 | |
2,890,739 | + | Dshi_2728 | 0.23 | -0.6 | |
2,890,771 | + | Dshi_2728 | 0.26 | -0.4 | |
2,890,954 | + | Dshi_2728 | 0.40 | -1.0 | |
2,890,987 | - | Dshi_2728 | 0.43 | +0.4 | |
2,891,078 | + | Dshi_2728 | 0.50 | +0.2 | |
2,891,629 | + | +0.3 | |||
2,891,637 | - | -0.1 | |||
2,891,664 | + | -0.3 | |||
2,891,665 | + | -2.8 | |||
2,891,713 | - | +0.2 | |||
2,891,753 | - | +1.0 | |||
2,891,794 | + | -0.3 | |||
2,891,794 | + | -0.2 | |||
2,891,807 | - | -0.7 | |||
2,891,828 | + | +0.9 | |||
2,891,914 | - | Dshi_2729 | 0.14 | -0.2 | |
2,891,934 | - | Dshi_2729 | 0.17 | +1.0 | |
2,891,955 | + | Dshi_2729 | 0.19 | -1.9 | |
2,891,955 | + | Dshi_2729 | 0.19 | -1.7 | |
2,891,963 | - | Dshi_2729 | 0.20 | +1.6 | |
2,891,963 | - | Dshi_2729 | 0.20 | +0.3 | |
2,891,991 | - | Dshi_2729 | 0.23 | +0.9 | |
2,892,302 | + | Dshi_2729 | 0.59 | +0.6 |
Or see this region's nucleotide sequence