Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2644 and Dshi_2645 are separated by 3 nucleotides Dshi_2645 and Dshi_2646 are separated by 31 nucleotides Dshi_2646 and Dshi_2647 are separated by 283 nucleotides
Dshi_2644: Dshi_2644 - export-related chaperone CsaA (RefSeq), at 2,801,317 to 2,801,655
_2644
Dshi_2645: Dshi_2645 - pyrroline-5-carboxylate reductase (RefSeq), at 2,801,659 to 2,802,480
_2645
Dshi_2646: Dshi_2646 - Protein of unknown function DUF1790 (RefSeq), at 2,802,512 to 2,803,042
_2646
Dshi_2647: Dshi_2647 - hypothetical protein (RefSeq), at 2,803,326 to 2,804,246
_2647
Position (kb)
2802
2803
2804 Strain fitness (log2 ratio)
-2
-1
0
1 at 2801.598 kb on - strand, within Dshi_2644 at 2802.529 kb on + strand at 2802.597 kb on + strand, within Dshi_2646 at 2802.597 kb on + strand, within Dshi_2646 at 2802.605 kb on - strand, within Dshi_2646 at 2802.605 kb on - strand, within Dshi_2646 at 2802.657 kb on - strand, within Dshi_2646 at 2802.657 kb on - strand, within Dshi_2646 at 2802.657 kb on - strand, within Dshi_2646 at 2802.738 kb on + strand, within Dshi_2646 at 2802.769 kb on - strand, within Dshi_2646 at 2802.896 kb on - strand, within Dshi_2646 at 2803.038 kb on + strand at 2803.046 kb on - strand at 2803.046 kb on - strand at 2803.080 kb on - strand at 2803.116 kb on - strand at 2803.133 kb on - strand at 2803.218 kb on + strand at 2803.277 kb on - strand at 2803.324 kb on + strand at 2803.332 kb on - strand at 2803.360 kb on - strand at 2803.381 kb on + strand at 2803.431 kb on - strand, within Dshi_2647 at 2803.466 kb on + strand, within Dshi_2647 at 2803.547 kb on + strand, within Dshi_2647 at 2803.853 kb on - strand, within Dshi_2647 at 2803.927 kb on - strand, within Dshi_2647 at 2804.039 kb on - strand, within Dshi_2647
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 2,801,598 - Dshi_2644 0.83 -0.7 2,802,529 + -0.1 2,802,597 + Dshi_2646 0.16 -0.8 2,802,597 + Dshi_2646 0.16 +0.6 2,802,605 - Dshi_2646 0.18 -1.6 2,802,605 - Dshi_2646 0.18 -0.4 2,802,657 - Dshi_2646 0.27 +0.7 2,802,657 - Dshi_2646 0.27 -0.5 2,802,657 - Dshi_2646 0.27 -1.8 2,802,738 + Dshi_2646 0.43 -1.1 2,802,769 - Dshi_2646 0.48 -1.2 2,802,896 - Dshi_2646 0.72 -1.3 2,803,038 + +1.0 2,803,046 - +1.2 2,803,046 - +0.8 2,803,080 - -0.2 2,803,116 - -1.0 2,803,133 - +0.7 2,803,218 + -0.1 2,803,277 - -0.7 2,803,324 + +0.8 2,803,332 - -1.0 2,803,360 - +0.1 2,803,381 + -0.2 2,803,431 - Dshi_2647 0.11 -1.1 2,803,466 + Dshi_2647 0.15 +0.2 2,803,547 + Dshi_2647 0.24 +0.5 2,803,853 - Dshi_2647 0.57 +0.3 2,803,927 - Dshi_2647 0.65 +0.4 2,804,039 - Dshi_2647 0.77 +0.3
Or see this region's nucleotide sequence