Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2609 and Dshi_2610 are separated by 193 nucleotides Dshi_2610 and Dshi_2611 are separated by 43 nucleotides Dshi_2611 and Dshi_2612 are separated by 203 nucleotides
Dshi_2609: Dshi_2609 - RNA polymerase, sigma 32 subunit, RpoH (RefSeq), at 2,772,541 to 2,773,437
_2609
Dshi_2610: Dshi_2610 - pseudouridine synthase, RluA family (RefSeq), at 2,773,631 to 2,774,674
_2610
Dshi_2611: Dshi_2611 - hypothetical protein (RefSeq), at 2,774,718 to 2,775,005
_2611
Dshi_2612: Dshi_2612 - Silent information regulator protein Sir2 (RefSeq), at 2,775,209 to 2,775,895
_2612
Position (kb)
2773
2774
2775 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2772.666 kb on + strand, within Dshi_2609 at 2772.793 kb on + strand, within Dshi_2609 at 2772.827 kb on - strand, within Dshi_2609 at 2772.837 kb on + strand, within Dshi_2609 at 2772.882 kb on + strand, within Dshi_2609 at 2772.890 kb on - strand, within Dshi_2609 at 2772.901 kb on - strand, within Dshi_2609 at 2773.009 kb on - strand, within Dshi_2609 at 2773.047 kb on - strand, within Dshi_2609 at 2773.274 kb on - strand, within Dshi_2609 at 2773.321 kb on - strand, within Dshi_2609 at 2773.398 kb on + strand at 2773.472 kb on + strand at 2773.523 kb on - strand at 2773.539 kb on + strand at 2773.539 kb on + strand at 2773.591 kb on + strand at 2773.655 kb on - strand at 2773.683 kb on + strand at 2773.979 kb on + strand, within Dshi_2610 at 2774.217 kb on + strand, within Dshi_2610 at 2774.342 kb on + strand, within Dshi_2610 at 2774.561 kb on + strand, within Dshi_2610 at 2774.575 kb on - strand at 2774.875 kb on - strand, within Dshi_2611 at 2775.077 kb on + strand at 2775.178 kb on - strand at 2775.306 kb on - strand, within Dshi_2612 at 2775.306 kb on - strand, within Dshi_2612 at 2775.390 kb on + strand, within Dshi_2612 at 2775.465 kb on + strand, within Dshi_2612 at 2775.542 kb on - strand, within Dshi_2612 at 2775.623 kb on + strand, within Dshi_2612 at 2775.653 kb on - strand, within Dshi_2612
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 2,772,666 + Dshi_2609 0.14 -1.1 2,772,793 + Dshi_2609 0.28 -1.2 2,772,827 - Dshi_2609 0.32 -0.5 2,772,837 + Dshi_2609 0.33 -2.1 2,772,882 + Dshi_2609 0.38 -1.4 2,772,890 - Dshi_2609 0.39 -2.8 2,772,901 - Dshi_2609 0.40 -0.7 2,773,009 - Dshi_2609 0.52 -3.5 2,773,047 - Dshi_2609 0.56 -1.8 2,773,274 - Dshi_2609 0.82 -1.9 2,773,321 - Dshi_2609 0.87 -1.6 2,773,398 + -1.4 2,773,472 + -0.8 2,773,523 - -0.0 2,773,539 + -0.1 2,773,539 + +0.3 2,773,591 + +0.1 2,773,655 - +0.3 2,773,683 + -1.4 2,773,979 + Dshi_2610 0.33 -1.9 2,774,217 + Dshi_2610 0.56 -1.0 2,774,342 + Dshi_2610 0.68 -0.4 2,774,561 + Dshi_2610 0.89 +1.3 2,774,575 - -1.8 2,774,875 - Dshi_2611 0.55 +1.2 2,775,077 + +0.5 2,775,178 - +0.1 2,775,306 - Dshi_2612 0.14 +0.2 2,775,306 - Dshi_2612 0.14 -0.2 2,775,390 + Dshi_2612 0.26 -0.1 2,775,465 + Dshi_2612 0.37 -0.0 2,775,542 - Dshi_2612 0.48 +0.3 2,775,623 + Dshi_2612 0.60 +0.7 2,775,653 - Dshi_2612 0.65 +0.6
Or see this region's nucleotide sequence