Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2373
Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Thallium(I) acetate 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,504,693 | - | +0.5 | |||
2,504,714 | - | +0.0 | |||
2,504,789 | + | -0.5 | |||
2,504,797 | - | -0.3 | |||
2,504,857 | + | Dshi_2372 | 0.17 | +0.4 | |
2,504,870 | - | Dshi_2372 | 0.19 | -0.6 | |
2,504,893 | - | Dshi_2372 | 0.22 | +0.5 | |
2,505,096 | + | Dshi_2372 | 0.52 | +0.1 | |
2,505,104 | - | Dshi_2372 | 0.53 | +0.9 | |
2,505,142 | + | Dshi_2372 | 0.59 | +0.2 | |
2,505,294 | + | Dshi_2372 | 0.81 | +0.9 | |
2,505,302 | - | Dshi_2372 | 0.82 | +0.7 | |
2,505,302 | - | Dshi_2372 | 0.82 | -0.1 | |
2,507,318 | - | +0.8 | |||
2,507,369 | + | -2.7 | |||
2,507,379 | + | +1.1 | |||
2,507,404 | + | -1.0 | |||
2,507,580 | - | +0.5 | |||
2,507,623 | + | Dshi_2374 | 0.13 | +2.4 | |
2,507,713 | - | Dshi_2374 | 0.21 | +0.4 | |
2,507,748 | - | Dshi_2374 | 0.23 | +0.4 | |
2,507,768 | - | Dshi_2374 | 0.25 | +0.0 | |
2,507,843 | - | Dshi_2374 | 0.31 | +0.1 | |
2,507,906 | - | Dshi_2374 | 0.36 | +0.6 | |
2,508,092 | + | Dshi_2374 | 0.51 | +0.1 | |
2,508,114 | + | Dshi_2374 | 0.53 | -0.9 |
Or see this region's nucleotide sequence