Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2264 and Dshi_2265 overlap by 4 nucleotides Dshi_2265 and Dshi_2266 are separated by 427 nucleotides
Dshi_2264: Dshi_2264 - sarcosine oxidase, alpha subunit family (RefSeq), at 2,386,296 to 2,389,238
_2264
Dshi_2265: Dshi_2265 - Sarcosine oxidase delta subunit heterotetrameric (RefSeq), at 2,389,235 to 2,389,498
_2265
Dshi_2266: Dshi_2266 - sarcosine oxidase, beta subunit family (RefSeq), at 2,389,926 to 2,391,176
_2266
Position (kb)
2389
2390 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2388.236 kb on - strand, within Dshi_2264 at 2388.256 kb on - strand, within Dshi_2264 at 2388.300 kb on - strand, within Dshi_2264 at 2388.306 kb on + strand, within Dshi_2264 at 2388.364 kb on + strand, within Dshi_2264 at 2388.456 kb on + strand, within Dshi_2264 at 2388.477 kb on + strand, within Dshi_2264 at 2388.543 kb on - strand, within Dshi_2264 at 2388.599 kb on - strand, within Dshi_2264 at 2388.637 kb on + strand, within Dshi_2264 at 2388.666 kb on - strand, within Dshi_2264 at 2388.700 kb on + strand, within Dshi_2264 at 2388.756 kb on - strand, within Dshi_2264 at 2388.756 kb on - strand, within Dshi_2264 at 2388.767 kb on + strand, within Dshi_2264 at 2388.772 kb on + strand, within Dshi_2264 at 2388.780 kb on - strand, within Dshi_2264 at 2388.780 kb on - strand, within Dshi_2264 at 2388.803 kb on - strand, within Dshi_2264 at 2388.803 kb on - strand, within Dshi_2264 at 2388.827 kb on + strand, within Dshi_2264 at 2388.834 kb on - strand, within Dshi_2264 at 2388.858 kb on + strand, within Dshi_2264 at 2388.866 kb on - strand, within Dshi_2264 at 2388.866 kb on - strand, within Dshi_2264 at 2388.923 kb on + strand, within Dshi_2264 at 2388.931 kb on - strand, within Dshi_2264 at 2389.042 kb on + strand at 2389.042 kb on + strand at 2389.097 kb on - strand at 2389.120 kb on - strand at 2389.120 kb on - strand at 2389.120 kb on - strand at 2389.120 kb on - strand at 2389.141 kb on - strand at 2389.152 kb on - strand at 2389.217 kb on + strand at 2389.220 kb on - strand at 2389.220 kb on - strand at 2389.323 kb on - strand, within Dshi_2265 at 2389.325 kb on - strand, within Dshi_2265 at 2389.325 kb on - strand, within Dshi_2265 at 2389.349 kb on + strand, within Dshi_2265 at 2389.375 kb on + strand, within Dshi_2265 at 2389.375 kb on + strand, within Dshi_2265 at 2389.396 kb on + strand, within Dshi_2265 at 2389.428 kb on - strand, within Dshi_2265 at 2389.434 kb on - strand, within Dshi_2265 at 2389.481 kb on - strand at 2389.508 kb on + strand at 2389.532 kb on - strand at 2389.554 kb on + strand at 2389.585 kb on - strand at 2389.647 kb on - strand at 2389.660 kb on - strand at 2389.662 kb on - strand at 2389.672 kb on + strand at 2389.734 kb on - strand at 2389.851 kb on - strand at 2389.906 kb on + strand at 2389.906 kb on + strand at 2389.909 kb on - strand at 2389.914 kb on - strand at 2389.937 kb on - strand at 2389.937 kb on - strand at 2389.937 kb on - strand at 2389.965 kb on + strand at 2389.974 kb on - strand at 2390.011 kb on + strand at 2390.019 kb on - strand at 2390.049 kb on + strand at 2390.062 kb on - strand, within Dshi_2266 at 2390.071 kb on + strand, within Dshi_2266 at 2390.071 kb on + strand, within Dshi_2266 at 2390.071 kb on + strand, within Dshi_2266 at 2390.083 kb on + strand, within Dshi_2266 at 2390.112 kb on + strand, within Dshi_2266 at 2390.120 kb on - strand, within Dshi_2266 at 2390.138 kb on + strand, within Dshi_2266 at 2390.171 kb on + strand, within Dshi_2266 at 2390.179 kb on - strand, within Dshi_2266 at 2390.179 kb on - strand, within Dshi_2266 at 2390.245 kb on + strand, within Dshi_2266 at 2390.275 kb on - strand, within Dshi_2266 at 2390.275 kb on - strand, within Dshi_2266 at 2390.326 kb on - strand, within Dshi_2266 at 2390.332 kb on + strand, within Dshi_2266 at 2390.340 kb on - strand, within Dshi_2266 at 2390.379 kb on + strand, within Dshi_2266 at 2390.411 kb on - strand, within Dshi_2266
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 2,388,236 - Dshi_2264 0.66 +0.6 2,388,256 - Dshi_2264 0.67 +0.0 2,388,300 - Dshi_2264 0.68 -0.1 2,388,306 + Dshi_2264 0.68 +0.5 2,388,364 + Dshi_2264 0.70 +1.0 2,388,456 + Dshi_2264 0.73 -0.5 2,388,477 + Dshi_2264 0.74 -2.6 2,388,543 - Dshi_2264 0.76 -0.9 2,388,599 - Dshi_2264 0.78 -0.6 2,388,637 + Dshi_2264 0.80 -0.1 2,388,666 - Dshi_2264 0.81 +0.1 2,388,700 + Dshi_2264 0.82 +0.2 2,388,756 - Dshi_2264 0.84 -0.1 2,388,756 - Dshi_2264 0.84 +0.5 2,388,767 + Dshi_2264 0.84 +0.7 2,388,772 + Dshi_2264 0.84 +0.6 2,388,780 - Dshi_2264 0.84 +0.2 2,388,780 - Dshi_2264 0.84 -0.2 2,388,803 - Dshi_2264 0.85 -0.6 2,388,803 - Dshi_2264 0.85 +1.0 2,388,827 + Dshi_2264 0.86 +0.8 2,388,834 - Dshi_2264 0.86 -0.4 2,388,858 + Dshi_2264 0.87 -2.2 2,388,866 - Dshi_2264 0.87 -0.3 2,388,866 - Dshi_2264 0.87 -0.5 2,388,923 + Dshi_2264 0.89 +0.4 2,388,931 - Dshi_2264 0.90 -1.9 2,389,042 + -0.1 2,389,042 + +1.3 2,389,097 - -0.2 2,389,120 - +0.3 2,389,120 - -0.2 2,389,120 - +0.6 2,389,120 - +2.2 2,389,141 - +0.6 2,389,152 - -0.0 2,389,217 + -1.0 2,389,220 - +0.1 2,389,220 - -0.4 2,389,323 - Dshi_2265 0.33 +0.2 2,389,325 - Dshi_2265 0.34 -2.9 2,389,325 - Dshi_2265 0.34 -1.6 2,389,349 + Dshi_2265 0.43 -1.9 2,389,375 + Dshi_2265 0.53 -1.4 2,389,375 + Dshi_2265 0.53 +1.3 2,389,396 + Dshi_2265 0.61 -0.9 2,389,428 - Dshi_2265 0.73 +0.3 2,389,434 - Dshi_2265 0.75 +0.7 2,389,481 - -0.6 2,389,508 + +0.2 2,389,532 - -1.1 2,389,554 + +0.3 2,389,585 - +1.1 2,389,647 - -3.0 2,389,660 - +0.0 2,389,662 - +1.5 2,389,672 + +0.3 2,389,734 - +0.4 2,389,851 - -0.4 2,389,906 + -0.6 2,389,906 + +1.3 2,389,909 - -0.3 2,389,914 - -0.1 2,389,937 - +1.4 2,389,937 - +0.7 2,389,937 - +0.7 2,389,965 + -1.0 2,389,974 - +0.1 2,390,011 + +0.8 2,390,019 - +2.0 2,390,049 + +0.3 2,390,062 - Dshi_2266 0.11 -0.0 2,390,071 + Dshi_2266 0.12 +0.4 2,390,071 + Dshi_2266 0.12 +0.2 2,390,071 + Dshi_2266 0.12 +0.3 2,390,083 + Dshi_2266 0.13 +0.1 2,390,112 + Dshi_2266 0.15 +1.1 2,390,120 - Dshi_2266 0.16 +0.3 2,390,138 + Dshi_2266 0.17 +0.1 2,390,171 + Dshi_2266 0.20 +1.7 2,390,179 - Dshi_2266 0.20 +0.2 2,390,179 - Dshi_2266 0.20 +0.4 2,390,245 + Dshi_2266 0.25 -0.7 2,390,275 - Dshi_2266 0.28 -0.0 2,390,275 - Dshi_2266 0.28 -0.6 2,390,326 - Dshi_2266 0.32 -0.5 2,390,332 + Dshi_2266 0.32 -1.2 2,390,340 - Dshi_2266 0.33 +0.6 2,390,379 + Dshi_2266 0.36 -0.7 2,390,411 - Dshi_2266 0.39 +0.0
Or see this region's nucleotide sequence