Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2079
Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | m.b. Thallium(I) acetate 0.004 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,198,644 | - | -0.7 | |||
| 2,199,452 | + | -0.4 | |||
| 2,199,467 | + | +0.3 | |||
| 2,199,537 | + | -0.3 | |||
| 2,199,591 | + | +0.3 | |||
| 2,199,647 | + | -1.2 | |||
| 2,199,731 | - | Dshi_2079 | 0.17 | -1.7 | |
| 2,199,885 | + | +1.0 | |||
| 2,200,065 | + | Dshi_2079 | 0.52 | -0.0 | |
| 2,200,079 | - | Dshi_2079 | 0.54 | -0.8 | |
| 2,200,187 | - | Dshi_2079 | 0.65 | -0.2 | |
| 2,200,246 | + | Dshi_2079 | 0.71 | -1.4 | |
| 2,200,352 | + | Dshi_2079 | 0.82 | -2.9 | |
| 2,200,412 | + | Dshi_2079 | 0.89 | -0.9 | |
| 2,200,435 | + | -0.9 | |||
| 2,200,461 | + | -2.0 | |||
| 2,201,514 | - | -0.5 |
Or see this region's nucleotide sequence