Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2061 and Dshi_2062 are separated by 159 nucleotides Dshi_2062 and Dshi_2063 overlap by 4 nucleotides Dshi_2063 and Dshi_2064 are separated by 32 nucleotides
Dshi_2061: Dshi_2061 - aspartate kinase (RefSeq), at 2,181,413 to 2,182,651
_2061
Dshi_2062: Dshi_2062 - PTSINtr with GAF domain, PtsP (RefSeq), at 2,182,811 to 2,185,054
_2062
Dshi_2063: Dshi_2063 - von Willebrand factor type A (RefSeq), at 2,185,051 to 2,185,806
_2063
Dshi_2064: Dshi_2064 - GCN5-related N-acetyltransferase (RefSeq), at 2,185,839 to 2,186,339
_2064
Position (kb)
2182
2183
2184
2185
2186 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2182.704 kb on - strand at 2182.977 kb on + strand at 2182.977 kb on + strand at 2182.985 kb on - strand at 2183.000 kb on - strand at 2183.015 kb on - strand at 2183.026 kb on - strand at 2183.264 kb on - strand, within Dshi_2062 at 2183.546 kb on - strand, within Dshi_2062 at 2183.791 kb on + strand, within Dshi_2062 at 2183.992 kb on + strand, within Dshi_2062 at 2184.086 kb on - strand, within Dshi_2062 at 2184.215 kb on - strand, within Dshi_2062 at 2184.281 kb on - strand, within Dshi_2062 at 2184.505 kb on - strand, within Dshi_2062 at 2184.618 kb on - strand, within Dshi_2062 at 2185.107 kb on - strand at 2185.173 kb on - strand, within Dshi_2063 at 2185.173 kb on - strand, within Dshi_2063 at 2185.192 kb on + strand, within Dshi_2063 at 2185.200 kb on - strand, within Dshi_2063 at 2185.292 kb on + strand, within Dshi_2063 at 2185.697 kb on - strand, within Dshi_2063 at 2185.730 kb on + strand, within Dshi_2063 at 2185.792 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 2,182,704 - +1.1 2,182,977 + -1.4 2,182,977 + -2.0 2,182,985 - -1.4 2,183,000 - -0.7 2,183,015 - -3.1 2,183,026 - -2.0 2,183,264 - Dshi_2062 0.20 -1.3 2,183,546 - Dshi_2062 0.33 -2.1 2,183,791 + Dshi_2062 0.44 -1.7 2,183,992 + Dshi_2062 0.53 -1.8 2,184,086 - Dshi_2062 0.57 +0.4 2,184,215 - Dshi_2062 0.63 -1.9 2,184,281 - Dshi_2062 0.66 -2.4 2,184,505 - Dshi_2062 0.75 +0.4 2,184,618 - Dshi_2062 0.81 -3.4 2,185,107 - -0.0 2,185,173 - Dshi_2063 0.16 -0.3 2,185,173 - Dshi_2063 0.16 +0.3 2,185,192 + Dshi_2063 0.19 +0.5 2,185,200 - Dshi_2063 0.20 -0.8 2,185,292 + Dshi_2063 0.32 -0.3 2,185,697 - Dshi_2063 0.85 -1.0 2,185,730 + Dshi_2063 0.90 +0.3 2,185,792 - -1.4
Or see this region's nucleotide sequence