Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1971 and Dshi_1972 are separated by 426 nucleotides Dshi_1972 and Dshi_1973 are separated by 59 nucleotides
Dshi_1971: Dshi_1971 - TRAP dicarboxylate transporter- DctP subunit (RefSeq), at 2,084,030 to 2,085,007
_1971
Dshi_1972: Dshi_1972 - GntR domain protein (RefSeq), at 2,085,434 to 2,086,216
_1972
Dshi_1973: Dshi_1973 - ATPase associated with various cellular activities AAA_3 (RefSeq), at 2,086,276 to 2,087,394
_1973
Position (kb)
2085
2086
2087 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2084.465 kb on + strand, within Dshi_1971 at 2084.685 kb on - strand, within Dshi_1971 at 2084.751 kb on - strand, within Dshi_1971 at 2084.751 kb on - strand, within Dshi_1971 at 2084.763 kb on + strand, within Dshi_1971 at 2084.771 kb on + strand, within Dshi_1971 at 2084.771 kb on - strand, within Dshi_1971 at 2084.841 kb on - strand, within Dshi_1971 at 2084.915 kb on + strand at 2085.031 kb on - strand at 2085.121 kb on + strand at 2085.502 kb on + strand at 2085.576 kb on + strand, within Dshi_1972 at 2085.668 kb on - strand, within Dshi_1972 at 2085.857 kb on + strand, within Dshi_1972 at 2085.922 kb on - strand, within Dshi_1972 at 2086.196 kb on + strand at 2086.243 kb on + strand at 2086.248 kb on + strand at 2086.251 kb on - strand at 2086.469 kb on + strand, within Dshi_1973 at 2086.510 kb on - strand, within Dshi_1973 at 2086.567 kb on - strand, within Dshi_1973 at 2086.578 kb on - strand, within Dshi_1973 at 2086.708 kb on + strand, within Dshi_1973 at 2086.786 kb on + strand, within Dshi_1973 at 2086.875 kb on - strand, within Dshi_1973 at 2086.888 kb on + strand, within Dshi_1973 at 2086.896 kb on - strand, within Dshi_1973 at 2086.968 kb on - strand, within Dshi_1973 at 2086.968 kb on - strand, within Dshi_1973 at 2087.071 kb on - strand, within Dshi_1973
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 2,084,465 + Dshi_1971 0.44 -0.1 2,084,685 - Dshi_1971 0.67 -0.3 2,084,751 - Dshi_1971 0.74 -0.4 2,084,751 - Dshi_1971 0.74 -2.3 2,084,763 + Dshi_1971 0.75 -1.0 2,084,771 + Dshi_1971 0.76 +1.2 2,084,771 - Dshi_1971 0.76 -0.7 2,084,841 - Dshi_1971 0.83 -0.8 2,084,915 + -0.1 2,085,031 - -2.8 2,085,121 + +0.7 2,085,502 + -1.8 2,085,576 + Dshi_1972 0.18 -2.6 2,085,668 - Dshi_1972 0.30 -3.2 2,085,857 + Dshi_1972 0.54 -2.0 2,085,922 - Dshi_1972 0.62 -1.1 2,086,196 + -2.8 2,086,243 + -0.8 2,086,248 + -0.3 2,086,251 - -0.6 2,086,469 + Dshi_1973 0.17 -0.6 2,086,510 - Dshi_1973 0.21 +0.8 2,086,567 - Dshi_1973 0.26 +0.6 2,086,578 - Dshi_1973 0.27 +0.5 2,086,708 + Dshi_1973 0.39 -0.1 2,086,786 + Dshi_1973 0.46 +0.1 2,086,875 - Dshi_1973 0.54 -0.2 2,086,888 + Dshi_1973 0.55 +0.8 2,086,896 - Dshi_1973 0.55 +0.1 2,086,968 - Dshi_1973 0.62 +0.3 2,086,968 - Dshi_1973 0.62 -0.3 2,087,071 - Dshi_1973 0.71 +0.2
Or see this region's nucleotide sequence