Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1832 and Dshi_1833 overlap by 1 nucleotides Dshi_1833 and Dshi_1834 are separated by 63 nucleotides Dshi_1834 and Dshi_1835 are separated by 156 nucleotides
Dshi_1832: Dshi_1832 - TRAP dicarboxylate transporter, DctM subunit (RefSeq), at 1,911,569 to 1,912,909
_1832
Dshi_1833: Dshi_1833 - Tripartite ATP-independent periplasmic transporter DctQ component (RefSeq), at 1,912,909 to 1,913,475
_1833
Dshi_1834: Dshi_1834 - TRAP dicarboxylate transporter- DctP subunit (RefSeq), at 1,913,539 to 1,914,555
_1834
Dshi_1835: Dshi_1835 - transcriptional regulator, GntR family with aminotransferase domain (RefSeq), at 1,914,712 to 1,916,187
_1835
Position (kb)
1913
1914
1915 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1912.612 kb on - strand, within Dshi_1832 at 1912.652 kb on + strand, within Dshi_1832 at 1912.657 kb on + strand, within Dshi_1832 at 1912.700 kb on - strand, within Dshi_1832 at 1912.792 kb on + strand at 1912.839 kb on - strand at 1913.081 kb on + strand, within Dshi_1833 at 1913.110 kb on + strand, within Dshi_1833 at 1913.113 kb on - strand, within Dshi_1833 at 1913.129 kb on - strand, within Dshi_1833 at 1913.167 kb on + strand, within Dshi_1833 at 1913.189 kb on + strand, within Dshi_1833 at 1913.251 kb on - strand, within Dshi_1833 at 1913.286 kb on - strand, within Dshi_1833 at 1913.370 kb on - strand, within Dshi_1833 at 1913.380 kb on - strand, within Dshi_1833 at 1913.476 kb on + strand at 1913.485 kb on + strand at 1913.577 kb on - strand at 1913.639 kb on - strand at 1913.736 kb on + strand, within Dshi_1834 at 1913.875 kb on + strand, within Dshi_1834 at 1913.875 kb on + strand, within Dshi_1834 at 1913.880 kb on - strand, within Dshi_1834 at 1913.911 kb on + strand, within Dshi_1834 at 1913.964 kb on - strand, within Dshi_1834 at 1914.118 kb on + strand, within Dshi_1834 at 1914.148 kb on - strand, within Dshi_1834 at 1914.168 kb on + strand, within Dshi_1834 at 1914.215 kb on - strand, within Dshi_1834 at 1914.255 kb on - strand, within Dshi_1834 at 1914.263 kb on + strand, within Dshi_1834 at 1914.270 kb on + strand, within Dshi_1834 at 1914.434 kb on - strand, within Dshi_1834 at 1914.494 kb on - strand at 1914.500 kb on - strand at 1914.624 kb on + strand at 1914.632 kb on - strand at 1914.632 kb on - strand at 1914.634 kb on + strand at 1914.770 kb on - strand at 1914.817 kb on + strand at 1914.898 kb on - strand, within Dshi_1835 at 1914.937 kb on + strand, within Dshi_1835 at 1914.999 kb on + strand, within Dshi_1835 at 1915.062 kb on + strand, within Dshi_1835 at 1915.099 kb on + strand, within Dshi_1835 at 1915.104 kb on + strand, within Dshi_1835 at 1915.311 kb on - strand, within Dshi_1835 at 1915.387 kb on + strand, within Dshi_1835 at 1915.430 kb on + strand, within Dshi_1835 at 1915.496 kb on + strand, within Dshi_1835 at 1915.543 kb on + strand, within Dshi_1835
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 1,912,612 - Dshi_1832 0.78 -0.9 1,912,652 + Dshi_1832 0.81 -1.4 1,912,657 + Dshi_1832 0.81 +0.2 1,912,700 - Dshi_1832 0.84 -1.3 1,912,792 + -0.4 1,912,839 - -1.0 1,913,081 + Dshi_1833 0.30 -0.9 1,913,110 + Dshi_1833 0.35 -1.6 1,913,113 - Dshi_1833 0.36 -0.2 1,913,129 - Dshi_1833 0.39 +0.0 1,913,167 + Dshi_1833 0.46 -1.0 1,913,189 + Dshi_1833 0.49 +0.7 1,913,251 - Dshi_1833 0.60 -0.3 1,913,286 - Dshi_1833 0.66 +1.0 1,913,370 - Dshi_1833 0.81 -0.2 1,913,380 - Dshi_1833 0.83 -0.0 1,913,476 + -0.1 1,913,485 + -0.6 1,913,577 - -0.3 1,913,639 - -1.3 1,913,736 + Dshi_1834 0.19 -0.8 1,913,875 + Dshi_1834 0.33 -0.4 1,913,875 + Dshi_1834 0.33 -0.8 1,913,880 - Dshi_1834 0.34 -0.6 1,913,911 + Dshi_1834 0.37 -0.6 1,913,964 - Dshi_1834 0.42 -1.2 1,914,118 + Dshi_1834 0.57 -1.2 1,914,148 - Dshi_1834 0.60 -2.3 1,914,168 + Dshi_1834 0.62 -0.6 1,914,215 - Dshi_1834 0.66 -1.6 1,914,255 - Dshi_1834 0.70 +0.2 1,914,263 + Dshi_1834 0.71 +0.1 1,914,270 + Dshi_1834 0.72 -0.4 1,914,434 - Dshi_1834 0.88 -1.7 1,914,494 - -1.2 1,914,500 - -1.8 1,914,624 + -1.0 1,914,632 - -0.6 1,914,632 - -1.2 1,914,634 + +0.0 1,914,770 - -0.5 1,914,817 + -1.1 1,914,898 - Dshi_1835 0.13 -0.7 1,914,937 + Dshi_1835 0.15 -1.5 1,914,999 + Dshi_1835 0.19 -2.0 1,915,062 + Dshi_1835 0.24 -0.8 1,915,099 + Dshi_1835 0.26 -0.4 1,915,104 + Dshi_1835 0.27 -0.8 1,915,311 - Dshi_1835 0.41 +0.4 1,915,387 + Dshi_1835 0.46 +0.3 1,915,430 + Dshi_1835 0.49 -3.5 1,915,496 + Dshi_1835 0.53 -0.5 1,915,543 + Dshi_1835 0.56 -0.3
Or see this region's nucleotide sequence