Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1784 and Dshi_1785 are separated by 712 nucleotides Dshi_1785 and Dshi_1786 are separated by 692 nucleotides
Dshi_1784: Dshi_1784 - RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq), at 1,853,035 to 1,853,577
_1784
Dshi_1785: Dshi_1785 - ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent (RefSeq), at 1,854,290 to 1,857,964
_1785
Dshi_1786: Dshi_1786 - hypothetical protein (RefSeq), at 1,858,657 to 1,859,097
_1786
Position (kb)
1854
1855
1856
1857
1858 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1853.308 kb on - strand, within Dshi_1784 at 1853.560 kb on + strand at 1853.627 kb on - strand at 1853.753 kb on - strand at 1853.783 kb on + strand at 1853.857 kb on - strand at 1853.857 kb on - strand at 1853.968 kb on + strand at 1853.968 kb on + strand at 1853.969 kb on - strand at 1854.173 kb on - strand at 1854.554 kb on + strand at 1854.721 kb on + strand, within Dshi_1785 at 1855.278 kb on - strand, within Dshi_1785 at 1856.052 kb on - strand, within Dshi_1785 at 1856.726 kb on + strand, within Dshi_1785 at 1857.456 kb on + strand, within Dshi_1785 at 1857.482 kb on - strand, within Dshi_1785 at 1858.051 kb on - strand at 1858.065 kb on - strand at 1858.348 kb on + strand at 1858.356 kb on - strand at 1858.356 kb on - strand at 1858.356 kb on - strand at 1858.361 kb on - strand at 1858.361 kb on - strand at 1858.514 kb on + strand at 1858.536 kb on + strand at 1858.536 kb on + strand at 1858.544 kb on - strand at 1858.624 kb on + strand at 1858.659 kb on + strand at 1858.661 kb on + strand at 1858.661 kb on + strand at 1858.679 kb on - strand at 1858.785 kb on + strand, within Dshi_1786 at 1858.800 kb on + strand, within Dshi_1786 at 1858.813 kb on - strand, within Dshi_1786 at 1858.844 kb on + strand, within Dshi_1786 at 1858.863 kb on - strand, within Dshi_1786 at 1858.883 kb on + strand, within Dshi_1786 at 1858.883 kb on + strand, within Dshi_1786
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 1,853,308 - Dshi_1784 0.50 -0.1 1,853,560 + +2.0 1,853,627 - +0.0 1,853,753 - +0.5 1,853,783 + +0.1 1,853,857 - -1.0 1,853,857 - -0.1 1,853,968 + -1.4 1,853,968 + -0.2 1,853,969 - -1.0 1,854,173 - -1.8 1,854,554 + -1.6 1,854,721 + Dshi_1785 0.12 +1.3 1,855,278 - Dshi_1785 0.27 -0.1 1,856,052 - Dshi_1785 0.48 -1.0 1,856,726 + Dshi_1785 0.66 -0.8 1,857,456 + Dshi_1785 0.86 -0.3 1,857,482 - Dshi_1785 0.87 +1.0 1,858,051 - +0.5 1,858,065 - +0.3 1,858,348 + -0.5 1,858,356 - -0.7 1,858,356 - -0.8 1,858,356 - +0.1 1,858,361 - -2.0 1,858,361 - -1.3 1,858,514 + -0.4 1,858,536 + +0.2 1,858,536 + -0.5 1,858,544 - -0.6 1,858,624 + -0.4 1,858,659 + +0.3 1,858,661 + +0.1 1,858,661 + +0.2 1,858,679 - +0.4 1,858,785 + Dshi_1786 0.29 +0.6 1,858,800 + Dshi_1786 0.32 -0.1 1,858,813 - Dshi_1786 0.35 +1.0 1,858,844 + Dshi_1786 0.42 +0.2 1,858,863 - Dshi_1786 0.47 +0.2 1,858,883 + Dshi_1786 0.51 +0.5 1,858,883 + Dshi_1786 0.51 -0.8
Or see this region's nucleotide sequence