Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1701 and Dshi_1702 overlap by 4 nucleotides Dshi_1702 and Dshi_1703 overlap by 4 nucleotides Dshi_1703 and Dshi_1704 are separated by 77 nucleotides
Dshi_1701: Dshi_1701 - ABC-3 protein (RefSeq), at 1,770,402 to 1,771,202
_1701
Dshi_1702: Dshi_1702 - ABC transporter related (RefSeq), at 1,771,199 to 1,771,942
_1702
Dshi_1703: Dshi_1703 - putative ferric uptake regulator, Fur family (RefSeq), at 1,771,939 to 1,772,436
_1703
Dshi_1704: Dshi_1704 - periplasmic solute binding protein (RefSeq), at 1,772,514 to 1,773,584
_1704
Position (kb)
1771
1772
1773 Strain fitness (log2 ratio)
-2
-1
0
1 at 1771.164 kb on + strand at 1771.265 kb on - strand at 1771.298 kb on - strand, within Dshi_1702 at 1771.330 kb on - strand, within Dshi_1702 at 1771.509 kb on - strand, within Dshi_1702 at 1771.563 kb on + strand, within Dshi_1702 at 1771.563 kb on + strand, within Dshi_1702 at 1771.599 kb on - strand, within Dshi_1702 at 1771.674 kb on + strand, within Dshi_1702 at 1771.822 kb on - strand, within Dshi_1702 at 1771.891 kb on - strand at 1771.891 kb on - strand at 1771.891 kb on - strand at 1771.891 kb on - strand at 1771.891 kb on - strand at 1771.891 kb on - strand at 1771.977 kb on - strand at 1772.132 kb on - strand, within Dshi_1703 at 1772.137 kb on - strand at 1772.161 kb on + strand, within Dshi_1703 at 1772.523 kb on + strand at 1772.568 kb on + strand at 1772.751 kb on + strand, within Dshi_1704 at 1772.792 kb on - strand, within Dshi_1704 at 1772.807 kb on - strand, within Dshi_1704 at 1772.822 kb on + strand, within Dshi_1704 at 1773.205 kb on - strand at 1773.314 kb on - strand, within Dshi_1704 at 1773.364 kb on - strand, within Dshi_1704 at 1773.392 kb on + strand, within Dshi_1704
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 1,771,164 + +0.8 1,771,265 - +0.1 1,771,298 - Dshi_1702 0.13 -0.6 1,771,330 - Dshi_1702 0.18 +0.8 1,771,509 - Dshi_1702 0.42 +1.0 1,771,563 + Dshi_1702 0.49 +0.8 1,771,563 + Dshi_1702 0.49 -0.0 1,771,599 - Dshi_1702 0.54 +1.0 1,771,674 + Dshi_1702 0.64 +1.1 1,771,822 - Dshi_1702 0.84 +0.2 1,771,891 - +1.1 1,771,891 - -0.2 1,771,891 - +0.6 1,771,891 - +0.6 1,771,891 - -0.1 1,771,891 - -0.4 1,771,977 - -1.6 1,772,132 - Dshi_1703 0.39 -1.4 1,772,137 - -2.0 1,772,161 + Dshi_1703 0.45 -0.6 1,772,523 + +0.8 1,772,568 + -0.5 1,772,751 + Dshi_1704 0.22 +1.2 1,772,792 - Dshi_1704 0.26 -1.2 1,772,807 - Dshi_1704 0.27 +0.5 1,772,822 + Dshi_1704 0.29 +0.1 1,773,205 - -0.6 1,773,314 - Dshi_1704 0.75 +0.3 1,773,364 - Dshi_1704 0.79 +1.0 1,773,392 + Dshi_1704 0.82 -0.4
Or see this region's nucleotide sequence