Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1684
Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Thallium(I) acetate 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,752,523 | + | Dshi_1683 | 0.14 | -1.6 | |
1,752,523 | + | Dshi_1683 | 0.14 | -3.3 | |
1,752,573 | + | Dshi_1683 | 0.21 | -0.6 | |
1,752,687 | + | Dshi_1683 | 0.38 | +1.2 | |
1,752,866 | - | Dshi_1683 | 0.65 | -2.2 | |
1,754,586 | - | -0.7 | |||
1,754,587 | + | +0.6 | |||
1,754,629 | + | +0.1 | |||
1,754,723 | + | -0.2 | |||
1,754,760 | - | -0.4 | |||
1,754,878 | - | -0.9 | |||
1,754,930 | - | Dshi_1685 | 0.12 | -0.7 | |
1,754,986 | - | Dshi_1685 | 0.18 | -0.3 | |
1,754,992 | + | Dshi_1685 | 0.19 | +1.0 | |
1,755,001 | - | Dshi_1685 | 0.20 | -0.1 | |
1,755,001 | - | Dshi_1685 | 0.20 | +2.0 | |
1,755,054 | - | Dshi_1685 | 0.26 | -0.1 | |
1,755,115 | + | Dshi_1685 | 0.32 | -0.3 | |
1,755,138 | + | Dshi_1685 | 0.34 | -0.1 | |
1,755,255 | - | Dshi_1685 | 0.47 | +1.1 | |
1,755,421 | + | Dshi_1685 | 0.64 | -0.2 | |
1,755,461 | - | Dshi_1685 | 0.69 | -0.7 | |
1,755,498 | + | Dshi_1685 | 0.72 | +0.3 |
Or see this region's nucleotide sequence