Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1683

Experiment: m.b. Thallium(I) acetate 0.004 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDshi_1682 and Dshi_1683 are separated by 24 nucleotidesDshi_1683 and Dshi_1684 are separated by 11 nucleotides Dshi_1682: Dshi_1682 - Glucose-6-phosphate isomerase (RefSeq), at 1,750,801 to 1,752,405 _1682 Dshi_1683: Dshi_1683 - 6-phosphogluconolactonase (RefSeq), at 1,752,430 to 1,753,104 _1683 Dshi_1684: Dshi_1684 - glucose-6-phosphate 1-dehydrogenase (RefSeq), at 1,753,116 to 1,754,570 _1684 Position (kb) 1752 1753 1754Strain fitness (log2 ratio) -3 -2 -1 0 1at 1752.523 kb on + strand, within Dshi_1683at 1752.523 kb on + strand, within Dshi_1683at 1752.573 kb on + strand, within Dshi_1683at 1752.687 kb on + strand, within Dshi_1683at 1752.866 kb on - strand, within Dshi_1683

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml
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1,752,523 + Dshi_1683 0.14 -1.6
1,752,523 + Dshi_1683 0.14 -3.3
1,752,573 + Dshi_1683 0.21 -0.6
1,752,687 + Dshi_1683 0.38 +1.2
1,752,866 - Dshi_1683 0.65 -2.2

Or see this region's nucleotide sequence