Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1669 and Dshi_1670 overlap by 4 nucleotides Dshi_1670 and Dshi_1671 are separated by 16 nucleotides Dshi_1671 and Dshi_1672 are separated by 43 nucleotides Dshi_1672 and Dshi_1673 overlap by 29 nucleotides
Dshi_1669: Dshi_1669 - Nitrate reductase (EC 1.7.99.4) (from data) , at 1,736,304 to 1,738,925
_1669
Dshi_1670: Dshi_1670 - glycosyl transferase family 3 (RefSeq), at 1,738,922 to 1,739,893
_1670
Dshi_1671: Dshi_1671 - uroporphyrin-III C-methyltransferase (RefSeq), at 1,739,910 to 1,741,304
_1671
Dshi_1672: Dshi_1672 - ribosomal RNA methyltransferase RrmJ/FtsJ (RefSeq), at 1,741,348 to 1,742,121
_1672
Dshi_1673: Dshi_1673 - Ppx/GppA phosphatase (RefSeq), at 1,742,093 to 1,743,274
_1673
Position (kb)
1739
1740
1741
1742 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1738.951 kb on + strand at 1738.994 kb on - strand at 1739.018 kb on - strand at 1739.054 kb on + strand, within Dshi_1670 at 1739.056 kb on + strand, within Dshi_1670 at 1739.175 kb on + strand, within Dshi_1670 at 1739.249 kb on - strand, within Dshi_1670 at 1739.280 kb on - strand, within Dshi_1670 at 1739.303 kb on + strand, within Dshi_1670 at 1739.366 kb on - strand, within Dshi_1670 at 1739.607 kb on - strand, within Dshi_1670 at 1739.685 kb on - strand, within Dshi_1670 at 1739.833 kb on - strand at 1739.857 kb on + strand at 1739.910 kb on + strand at 1740.185 kb on + strand, within Dshi_1671 at 1740.214 kb on - strand, within Dshi_1671 at 1740.224 kb on + strand, within Dshi_1671 at 1740.240 kb on + strand, within Dshi_1671 at 1740.240 kb on + strand, within Dshi_1671 at 1740.248 kb on - strand, within Dshi_1671 at 1740.304 kb on + strand, within Dshi_1671 at 1740.463 kb on + strand, within Dshi_1671 at 1740.572 kb on + strand, within Dshi_1671 at 1740.582 kb on + strand, within Dshi_1671 at 1740.662 kb on + strand, within Dshi_1671 at 1740.752 kb on - strand, within Dshi_1671 at 1740.824 kb on + strand, within Dshi_1671 at 1740.828 kb on + strand, within Dshi_1671 at 1740.828 kb on + strand, within Dshi_1671 at 1740.947 kb on - strand, within Dshi_1671 at 1741.017 kb on - strand, within Dshi_1671 at 1741.101 kb on + strand, within Dshi_1671 at 1741.109 kb on - strand, within Dshi_1671 at 1741.241 kb on - strand at 1741.241 kb on - strand at 1741.283 kb on - strand at 1742.144 kb on - strand at 1742.304 kb on + strand, within Dshi_1673
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 1,738,951 + -0.0 1,738,994 - +0.1 1,739,018 - +0.3 1,739,054 + Dshi_1670 0.14 +1.8 1,739,056 + Dshi_1670 0.14 -0.4 1,739,175 + Dshi_1670 0.26 +0.4 1,739,249 - Dshi_1670 0.34 +0.6 1,739,280 - Dshi_1670 0.37 +0.5 1,739,303 + Dshi_1670 0.39 +0.2 1,739,366 - Dshi_1670 0.46 -1.1 1,739,607 - Dshi_1670 0.70 -0.2 1,739,685 - Dshi_1670 0.78 +1.1 1,739,833 - -1.9 1,739,857 + +0.7 1,739,910 + -0.0 1,740,185 + Dshi_1671 0.20 +1.0 1,740,214 - Dshi_1671 0.22 -0.2 1,740,224 + Dshi_1671 0.23 -1.0 1,740,240 + Dshi_1671 0.24 -0.9 1,740,240 + Dshi_1671 0.24 +1.0 1,740,248 - Dshi_1671 0.24 +0.1 1,740,304 + Dshi_1671 0.28 +0.5 1,740,463 + Dshi_1671 0.40 -1.0 1,740,572 + Dshi_1671 0.47 -0.2 1,740,582 + Dshi_1671 0.48 -0.6 1,740,662 + Dshi_1671 0.54 -0.0 1,740,752 - Dshi_1671 0.60 +0.0 1,740,824 + Dshi_1671 0.66 +1.0 1,740,828 + Dshi_1671 0.66 -1.2 1,740,828 + Dshi_1671 0.66 +0.2 1,740,947 - Dshi_1671 0.74 +0.8 1,741,017 - Dshi_1671 0.79 +0.2 1,741,101 + Dshi_1671 0.85 +0.2 1,741,109 - Dshi_1671 0.86 -0.3 1,741,241 - +0.2 1,741,241 - -0.8 1,741,283 - +0.5 1,742,144 - -2.5 1,742,304 + Dshi_1673 0.18 -1.5
Or see this region's nucleotide sequence