Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1622 and Dshi_R0029 are separated by 280 nucleotides Dshi_R0029 and Dshi_1623 are separated by 159 nucleotides Dshi_1623 and Dshi_1624 are separated by 0 nucleotides Dshi_1624 and Dshi_1625 are separated by 29 nucleotides
Dshi_1622: Dshi_1622 - hypothetical protein (RefSeq), at 1,686,892 to 1,688,406
_1622
Dshi_R0029: Dshi_R0029 - tRNA-Arg (RefSeq), at 1,688,687 to 1,688,763
_R0029
Dshi_1623: Dshi_1623 - cysteine desulfurase, SufS subfamily (RefSeq), at 1,688,923 to 1,690,143
_1623
Dshi_1624: Dshi_1624 - hypothetical protein (RefSeq), at 1,690,144 to 1,690,743
_1624
Dshi_1625: Dshi_1625 - hypothetical protein (RefSeq), at 1,690,773 to 1,691,270
_1625
Position (kb)
1688
1689
1690
1691 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1688.042 kb on - strand, within Dshi_1622 at 1688.043 kb on - strand, within Dshi_1622 at 1688.048 kb on - strand, within Dshi_1622 at 1688.093 kb on + strand, within Dshi_1622 at 1688.093 kb on + strand, within Dshi_1622 at 1688.189 kb on - strand, within Dshi_1622 at 1688.343 kb on - strand at 1688.449 kb on - strand at 1688.471 kb on - strand at 1688.481 kb on + strand at 1688.499 kb on - strand at 1688.530 kb on + strand at 1688.620 kb on - strand at 1688.659 kb on - strand at 1688.815 kb on + strand at 1688.823 kb on - strand at 1688.923 kb on - strand at 1688.923 kb on - strand at 1690.678 kb on - strand, within Dshi_1624 at 1690.750 kb on + strand at 1690.758 kb on - strand at 1690.824 kb on + strand, within Dshi_1625 at 1690.939 kb on + strand, within Dshi_1625 at 1690.950 kb on + strand, within Dshi_1625 at 1691.007 kb on + strand, within Dshi_1625
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 1,688,042 - Dshi_1622 0.76 -1.2 1,688,043 - Dshi_1622 0.76 -0.5 1,688,048 - Dshi_1622 0.76 -1.4 1,688,093 + Dshi_1622 0.79 -0.5 1,688,093 + Dshi_1622 0.79 -0.3 1,688,189 - Dshi_1622 0.86 -0.4 1,688,343 - -1.2 1,688,449 - -0.3 1,688,471 - -0.4 1,688,481 + -0.6 1,688,499 - -0.3 1,688,530 + +0.2 1,688,620 - +0.8 1,688,659 - -0.6 1,688,815 + -2.4 1,688,823 - -0.0 1,688,923 - -2.8 1,688,923 - +0.1 1,690,678 - Dshi_1624 0.89 -0.6 1,690,750 + -2.0 1,690,758 - -1.7 1,690,824 + Dshi_1625 0.10 -2.4 1,690,939 + Dshi_1625 0.33 +0.1 1,690,950 + Dshi_1625 0.36 -1.4 1,691,007 + Dshi_1625 0.47 -0.9
Or see this region's nucleotide sequence