Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1493

Experiment: m.b. Thallium(I) acetate 0.004 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDshi_1492 and Dshi_1493 are separated by 109 nucleotidesDshi_1493 and Dshi_1494 are separated by 130 nucleotidesDshi_1494 and Dshi_1495 are separated by 65 nucleotides Dshi_1492: Dshi_1492 - tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq), at 1,551,737 to 1,552,627 _1492 Dshi_1493: Dshi_1493 - uridylate kinase (RefSeq), at 1,552,737 to 1,553,468 _1493 Dshi_1494: Dshi_1494 - ribosome recycling factor (RefSeq), at 1,553,599 to 1,554,165 _1494 Dshi_1495: Dshi_1495 - undecaprenyl diphosphate synthase (RefSeq), at 1,554,231 to 1,554,962 _1495 Position (kb) 1552 1553 1554Strain fitness (log2 ratio) -1 0 1at 1553.462 kb on + strandat 1553.500 kb on + strandat 1553.500 kb on + strandat 1553.532 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml
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1,553,462 + +0.2
1,553,500 + -0.5
1,553,500 + +0.8
1,553,532 - +0.3

Or see this region's nucleotide sequence