Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1400 and Dshi_1401 are separated by 11 nucleotides Dshi_1401 and Dshi_1402 are separated by 12 nucleotides Dshi_1402 and Dshi_1403 are separated by 4 nucleotides
Dshi_1400: Dshi_1400 - ABC transporter related (RefSeq), at 1,453,619 to 1,454,374
_1400
Dshi_1401: Dshi_1401 - ABC transporter related (RefSeq), at 1,454,386 to 1,455,144
_1401
Dshi_1402: Dshi_1402 - inner-membrane translocator (RefSeq), at 1,455,157 to 1,456,365
_1402
Dshi_1403: Dshi_1403 - inner-membrane translocator (RefSeq), at 1,456,370 to 1,457,401
_1403
Position (kb)
1455
1456
1457 Strain fitness (log2 ratio)
-2
-1
0
1 at 1454.195 kb on + strand, within Dshi_1400 at 1454.196 kb on + strand, within Dshi_1400 at 1454.224 kb on - strand, within Dshi_1400 at 1454.271 kb on + strand, within Dshi_1400 at 1454.354 kb on - strand at 1454.479 kb on - strand, within Dshi_1401 at 1454.616 kb on + strand, within Dshi_1401 at 1454.677 kb on - strand, within Dshi_1401 at 1454.816 kb on - strand, within Dshi_1401 at 1455.005 kb on - strand, within Dshi_1401 at 1455.010 kb on - strand, within Dshi_1401 at 1455.091 kb on + strand at 1455.147 kb on - strand at 1455.285 kb on + strand, within Dshi_1402 at 1455.404 kb on - strand, within Dshi_1402 at 1455.451 kb on + strand, within Dshi_1402 at 1455.459 kb on - strand, within Dshi_1402 at 1455.521 kb on + strand, within Dshi_1402 at 1455.582 kb on + strand, within Dshi_1402 at 1455.586 kb on + strand, within Dshi_1402 at 1455.911 kb on + strand, within Dshi_1402 at 1455.946 kb on + strand, within Dshi_1402 at 1455.946 kb on + strand, within Dshi_1402 at 1455.968 kb on + strand, within Dshi_1402 at 1456.163 kb on - strand, within Dshi_1402 at 1456.213 kb on - strand, within Dshi_1402 at 1456.270 kb on + strand at 1456.283 kb on + strand at 1456.301 kb on - strand at 1456.363 kb on + strand at 1456.375 kb on - strand at 1456.456 kb on + strand at 1456.560 kb on - strand, within Dshi_1403 at 1456.576 kb on + strand, within Dshi_1403 at 1456.576 kb on + strand, within Dshi_1403 at 1456.584 kb on - strand, within Dshi_1403 at 1456.606 kb on - strand, within Dshi_1403 at 1456.729 kb on - strand, within Dshi_1403 at 1456.764 kb on - strand, within Dshi_1403 at 1456.795 kb on - strand, within Dshi_1403 at 1456.997 kb on + strand, within Dshi_1403 at 1457.147 kb on + strand, within Dshi_1403 at 1457.215 kb on + strand, within Dshi_1403 at 1457.237 kb on - strand, within Dshi_1403 at 1457.302 kb on - strand at 1457.358 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 1,454,195 + Dshi_1400 0.76 -1.2 1,454,196 + Dshi_1400 0.76 +1.0 1,454,224 - Dshi_1400 0.80 -1.2 1,454,271 + Dshi_1400 0.86 +0.9 1,454,354 - -0.6 1,454,479 - Dshi_1401 0.12 -0.2 1,454,616 + Dshi_1401 0.30 +0.5 1,454,677 - Dshi_1401 0.38 +1.1 1,454,816 - Dshi_1401 0.57 -0.4 1,455,005 - Dshi_1401 0.82 +0.8 1,455,010 - Dshi_1401 0.82 -0.9 1,455,091 + +0.1 1,455,147 - +1.6 1,455,285 + Dshi_1402 0.11 -0.6 1,455,404 - Dshi_1402 0.20 -0.3 1,455,451 + Dshi_1402 0.24 +0.2 1,455,459 - Dshi_1402 0.25 -0.4 1,455,521 + Dshi_1402 0.30 +1.2 1,455,582 + Dshi_1402 0.35 +0.4 1,455,586 + Dshi_1402 0.35 -0.1 1,455,911 + Dshi_1402 0.62 -1.9 1,455,946 + Dshi_1402 0.65 -0.7 1,455,946 + Dshi_1402 0.65 +1.5 1,455,968 + Dshi_1402 0.67 -1.5 1,456,163 - Dshi_1402 0.83 +0.0 1,456,213 - Dshi_1402 0.87 -0.3 1,456,270 + +0.9 1,456,283 + +0.5 1,456,301 - -0.6 1,456,363 + -0.2 1,456,375 - +1.2 1,456,456 + -0.5 1,456,560 - Dshi_1403 0.18 -1.4 1,456,576 + Dshi_1403 0.20 +1.6 1,456,576 + Dshi_1403 0.20 +0.5 1,456,584 - Dshi_1403 0.21 +0.5 1,456,606 - Dshi_1403 0.23 -1.5 1,456,729 - Dshi_1403 0.35 +1.5 1,456,764 - Dshi_1403 0.38 +0.6 1,456,795 - Dshi_1403 0.41 -0.4 1,456,997 + Dshi_1403 0.61 -0.1 1,457,147 + Dshi_1403 0.75 -0.3 1,457,215 + Dshi_1403 0.82 -0.2 1,457,237 - Dshi_1403 0.84 +1.6 1,457,302 - +0.5 1,457,358 + -1.6
Or see this region's nucleotide sequence