Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1364 and Dshi_1365 are separated by 77 nucleotides Dshi_1365 and Dshi_1366 are separated by 219 nucleotides Dshi_1366 and Dshi_1367 are separated by 34 nucleotides
Dshi_1364: Dshi_1364 - hypothetical protein (RefSeq), at 1,417,662 to 1,418,054
_1364
Dshi_1365: Dshi_1365 - transcriptional regulator, TetR family (RefSeq), at 1,418,132 to 1,418,767
_1365
Dshi_1366: Dshi_1366 - aminotransferase class-III (RefSeq), at 1,418,987 to 1,420,312
_1366
Dshi_1367: Dshi_1367 - amidase, hydantoinase/carbamoylase family (RefSeq), at 1,420,347 to 1,421,621
_1367
Position (kb)
1418
1419
1420
1421 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1418.130 kb on + strand at 1418.130 kb on + strand at 1418.198 kb on + strand, within Dshi_1365 at 1418.244 kb on + strand, within Dshi_1365 at 1418.252 kb on - strand, within Dshi_1365 at 1418.291 kb on + strand, within Dshi_1365 at 1418.311 kb on - strand, within Dshi_1365 at 1418.312 kb on - strand, within Dshi_1365 at 1418.537 kb on + strand, within Dshi_1365 at 1418.561 kb on - strand, within Dshi_1365 at 1418.620 kb on - strand, within Dshi_1365 at 1418.668 kb on + strand, within Dshi_1365 at 1418.727 kb on - strand at 1418.742 kb on - strand at 1418.750 kb on + strand at 1418.770 kb on - strand at 1418.823 kb on + strand at 1418.829 kb on - strand at 1418.836 kb on + strand at 1418.858 kb on - strand at 1418.887 kb on + strand at 1418.895 kb on - strand at 1418.912 kb on - strand at 1418.919 kb on + strand at 1418.919 kb on + strand at 1418.919 kb on + strand at 1418.990 kb on + strand at 1419.007 kb on - strand at 1419.007 kb on - strand at 1419.012 kb on + strand at 1419.024 kb on + strand at 1419.063 kb on + strand at 1419.111 kb on - strand at 1419.128 kb on - strand, within Dshi_1366 at 1419.128 kb on - strand, within Dshi_1366 at 1419.146 kb on + strand, within Dshi_1366 at 1419.165 kb on - strand, within Dshi_1366 at 1419.276 kb on - strand, within Dshi_1366 at 1419.393 kb on - strand, within Dshi_1366 at 1419.393 kb on - strand, within Dshi_1366 at 1419.393 kb on - strand, within Dshi_1366 at 1419.702 kb on + strand, within Dshi_1366 at 1419.710 kb on - strand, within Dshi_1366 at 1419.780 kb on - strand, within Dshi_1366 at 1420.033 kb on + strand, within Dshi_1366 at 1420.109 kb on - strand, within Dshi_1366 at 1420.254 kb on - strand at 1420.366 kb on - strand at 1420.574 kb on - strand, within Dshi_1367 at 1420.963 kb on + strand, within Dshi_1367 at 1420.971 kb on - strand, within Dshi_1367 at 1420.971 kb on - strand, within Dshi_1367 at 1420.991 kb on - strand, within Dshi_1367 at 1421.065 kb on + strand, within Dshi_1367 at 1421.153 kb on + strand, within Dshi_1367 at 1421.269 kb on + strand, within Dshi_1367 at 1421.309 kb on - strand, within Dshi_1367
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 1,418,130 + +0.3 1,418,130 + +0.9 1,418,198 + Dshi_1365 0.10 +0.5 1,418,244 + Dshi_1365 0.18 -0.1 1,418,252 - Dshi_1365 0.19 +0.3 1,418,291 + Dshi_1365 0.25 +1.4 1,418,311 - Dshi_1365 0.28 +0.7 1,418,312 - Dshi_1365 0.28 +1.3 1,418,537 + Dshi_1365 0.64 +1.9 1,418,561 - Dshi_1365 0.67 +0.0 1,418,620 - Dshi_1365 0.77 +2.4 1,418,668 + Dshi_1365 0.84 +0.5 1,418,727 - +0.0 1,418,742 - +0.7 1,418,750 + +0.9 1,418,770 - -2.2 1,418,823 + +0.4 1,418,829 - +0.1 1,418,836 + -1.1 1,418,858 - +1.2 1,418,887 + +0.1 1,418,895 - +0.9 1,418,912 - +0.8 1,418,919 + -1.8 1,418,919 + +0.8 1,418,919 + +1.1 1,418,990 + -0.4 1,419,007 - +0.5 1,419,007 - +0.7 1,419,012 + +0.5 1,419,024 + +0.0 1,419,063 + +0.2 1,419,111 - -0.4 1,419,128 - Dshi_1366 0.11 -0.7 1,419,128 - Dshi_1366 0.11 -1.2 1,419,146 + Dshi_1366 0.12 +0.0 1,419,165 - Dshi_1366 0.13 +1.3 1,419,276 - Dshi_1366 0.22 -0.1 1,419,393 - Dshi_1366 0.31 +0.7 1,419,393 - Dshi_1366 0.31 -0.2 1,419,393 - Dshi_1366 0.31 -1.1 1,419,702 + Dshi_1366 0.54 -0.5 1,419,710 - Dshi_1366 0.55 -1.8 1,419,780 - Dshi_1366 0.60 -0.4 1,420,033 + Dshi_1366 0.79 +0.0 1,420,109 - Dshi_1366 0.85 -0.7 1,420,254 - +1.2 1,420,366 - +0.2 1,420,574 - Dshi_1367 0.18 +0.8 1,420,963 + Dshi_1367 0.48 -0.9 1,420,971 - Dshi_1367 0.49 +0.4 1,420,971 - Dshi_1367 0.49 +0.4 1,420,991 - Dshi_1367 0.51 -0.3 1,421,065 + Dshi_1367 0.56 +1.0 1,421,153 + Dshi_1367 0.63 +0.9 1,421,269 + Dshi_1367 0.72 -1.3 1,421,309 - Dshi_1367 0.75 -1.9
Or see this region's nucleotide sequence