Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1330 and Dshi_1331 are separated by 20 nucleotides Dshi_1331 and Dshi_1332 overlap by 1 nucleotides Dshi_1332 and Dshi_1333 are separated by 88 nucleotides
Dshi_1330: Dshi_1330 - biotin--acetyl-CoA-carboxylase ligase (RefSeq), at 1,381,070 to 1,381,825
_1330
Dshi_1331: Dshi_1331 - putative transcriptional acitvator, Baf family (RefSeq), at 1,381,846 to 1,382,616
_1331
Dshi_1332: Dshi_1332 - beta-lactamase domain protein (RefSeq), at 1,382,616 to 1,384,286
_1332
Dshi_1333: Dshi_1333 - DEAD/DEAH box helicase domain protein (RefSeq), at 1,384,375 to 1,385,856
_1333
Position (kb)
1382
1383
1384
1385 Strain fitness (log2 ratio)
-2
-1
0
1 at 1382.643 kb on - strand at 1382.997 kb on - strand, within Dshi_1332 at 1383.131 kb on + strand, within Dshi_1332 at 1383.171 kb on + strand, within Dshi_1332 at 1383.192 kb on + strand, within Dshi_1332 at 1383.672 kb on + strand, within Dshi_1332 at 1383.672 kb on + strand, within Dshi_1332 at 1383.832 kb on - strand, within Dshi_1332 at 1383.873 kb on + strand, within Dshi_1332 at 1383.929 kb on - strand, within Dshi_1332 at 1383.983 kb on + strand, within Dshi_1332 at 1384.148 kb on - strand at 1385.145 kb on + strand, within Dshi_1333
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 1,382,643 - -1.0 1,382,997 - Dshi_1332 0.23 -0.5 1,383,131 + Dshi_1332 0.31 -0.8 1,383,171 + Dshi_1332 0.33 +0.3 1,383,192 + Dshi_1332 0.34 -1.9 1,383,672 + Dshi_1332 0.63 -0.9 1,383,672 + Dshi_1332 0.63 +0.5 1,383,832 - Dshi_1332 0.73 -1.3 1,383,873 + Dshi_1332 0.75 +0.5 1,383,929 - Dshi_1332 0.79 -0.5 1,383,983 + Dshi_1332 0.82 -0.1 1,384,148 - -1.6 1,385,145 + Dshi_1333 0.52 -1.0
Or see this region's nucleotide sequence