Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1288 and Dshi_1289 are separated by 47 nucleotides Dshi_1289 and Dshi_1290 are separated by 91 nucleotides Dshi_1290 and Dshi_1291 are separated by 232 nucleotides Dshi_1291 and Dshi_1292 overlap by 4 nucleotides
Dshi_1288: Dshi_1288 - amidohydrolase (RefSeq), at 1,341,315 to 1,342,481
_1288
Dshi_1289: Dshi_1289 - glutamine amidotransferase class-I (RefSeq), at 1,342,529 to 1,343,269
_1289
Dshi_1290: Dshi_1290 - molybdenum cofactor biosynthesis protein A (RefSeq), at 1,343,361 to 1,344,371
_1290
Dshi_1291: Dshi_1291 - DNA alkylation repair enzyme (RefSeq), at 1,344,604 to 1,345,305
_1291
Dshi_1292: Dshi_1292 - pyridoxamine 5'-phosphate oxidase-related FMN-binding (RefSeq), at 1,345,302 to 1,345,850
_1292
Position (kb)
1343
1344
1345 Strain fitness (log2 ratio)
-2
-1
0
1 at 1342.443 kb on + strand at 1343.019 kb on - strand, within Dshi_1289 at 1343.019 kb on - strand, within Dshi_1289 at 1343.126 kb on + strand, within Dshi_1289 at 1343.263 kb on + strand at 1343.568 kb on + strand, within Dshi_1290 at 1344.216 kb on + strand, within Dshi_1290 at 1344.276 kb on + strand at 1344.359 kb on - strand at 1344.424 kb on - strand at 1344.536 kb on + strand at 1344.851 kb on - strand, within Dshi_1291 at 1344.854 kb on - strand, within Dshi_1291 at 1344.887 kb on + strand, within Dshi_1291 at 1344.895 kb on - strand, within Dshi_1291 at 1344.915 kb on - strand, within Dshi_1291 at 1344.981 kb on - strand, within Dshi_1291
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 1,342,443 + -1.0 1,343,019 - Dshi_1289 0.66 +0.3 1,343,019 - Dshi_1289 0.66 +0.8 1,343,126 + Dshi_1289 0.81 +0.5 1,343,263 + -0.2 1,343,568 + Dshi_1290 0.20 -0.1 1,344,216 + Dshi_1290 0.85 -0.6 1,344,276 + -1.2 1,344,359 - +0.3 1,344,424 - -0.5 1,344,536 + -2.4 1,344,851 - Dshi_1291 0.35 +0.2 1,344,854 - Dshi_1291 0.36 -1.3 1,344,887 + Dshi_1291 0.40 -0.3 1,344,895 - Dshi_1291 0.41 +0.5 1,344,915 - Dshi_1291 0.44 -0.1 1,344,981 - Dshi_1291 0.54 +1.1
Or see this region's nucleotide sequence