Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1231 and Dshi_1232 are separated by 215 nucleotides Dshi_1232 and Dshi_1233 are separated by 133 nucleotides Dshi_1233 and Dshi_1234 are separated by 12 nucleotides
Dshi_1231: Dshi_1231 - beta-lactamase domain protein (RefSeq), at 1,274,344 to 1,275,300
_1231
Dshi_1232: Dshi_1232 - isoprenylcysteine carboxyl methyltransferase family protein (RefSeq), at 1,275,516 to 1,275,992
_1232
Dshi_1233: Dshi_1233 - NAD(P) transhydrogenase, alpha subunit (RefSeq), at 1,276,126 to 1,277,742
_1233
Dshi_1234: Dshi_1234 - NAD(P)(+) transhydrogenase (AB-specific) (RefSeq), at 1,277,755 to 1,279,251
_1234
Position (kb)
1276
1277
1278 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1275.135 kb on - strand, within Dshi_1231 at 1275.181 kb on + strand, within Dshi_1231 at 1275.224 kb on + strand at 1275.229 kb on - strand at 1275.232 kb on - strand at 1275.319 kb on - strand at 1275.344 kb on - strand at 1275.414 kb on + strand at 1275.422 kb on - strand at 1275.599 kb on - strand, within Dshi_1232 at 1275.664 kb on + strand, within Dshi_1232 at 1275.664 kb on + strand, within Dshi_1232 at 1275.679 kb on + strand, within Dshi_1232 at 1275.821 kb on + strand, within Dshi_1232 at 1275.821 kb on + strand, within Dshi_1232 at 1275.844 kb on + strand, within Dshi_1232 at 1275.860 kb on - strand, within Dshi_1232 at 1275.879 kb on + strand at 1275.887 kb on - strand, within Dshi_1232 at 1275.948 kb on - strand at 1275.976 kb on + strand at 1276.009 kb on + strand at 1276.168 kb on + strand at 1276.314 kb on + strand, within Dshi_1233 at 1276.337 kb on - strand, within Dshi_1233 at 1276.338 kb on - strand, within Dshi_1233 at 1276.479 kb on + strand, within Dshi_1233 at 1276.502 kb on - strand, within Dshi_1233 at 1276.528 kb on + strand, within Dshi_1233 at 1276.600 kb on - strand, within Dshi_1233 at 1276.600 kb on - strand, within Dshi_1233 at 1276.639 kb on + strand, within Dshi_1233 at 1276.639 kb on + strand, within Dshi_1233 at 1277.214 kb on + strand, within Dshi_1233 at 1277.458 kb on - strand, within Dshi_1233 at 1277.493 kb on - strand, within Dshi_1233 at 1277.560 kb on + strand, within Dshi_1233 at 1277.568 kb on - strand, within Dshi_1233 at 1277.621 kb on - strand at 1277.621 kb on - strand at 1277.621 kb on - strand at 1277.911 kb on + strand, within Dshi_1234 at 1277.911 kb on + strand, within Dshi_1234 at 1277.919 kb on - strand, within Dshi_1234 at 1277.919 kb on - strand, within Dshi_1234 at 1277.933 kb on + strand, within Dshi_1234 at 1278.096 kb on + strand, within Dshi_1234 at 1278.096 kb on + strand, within Dshi_1234 at 1278.194 kb on - strand, within Dshi_1234 at 1278.451 kb on + strand, within Dshi_1234 at 1278.488 kb on - strand, within Dshi_1234 at 1278.488 kb on - strand, within Dshi_1234
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 1,275,135 - Dshi_1231 0.83 -1.6 1,275,181 + Dshi_1231 0.87 +0.2 1,275,224 + -0.1 1,275,229 - +0.3 1,275,232 - +1.4 1,275,319 - -1.0 1,275,344 - +1.0 1,275,414 + -1.4 1,275,422 - +0.7 1,275,599 - Dshi_1232 0.17 -0.3 1,275,664 + Dshi_1232 0.31 -0.6 1,275,664 + Dshi_1232 0.31 +2.0 1,275,679 + Dshi_1232 0.34 +0.3 1,275,821 + Dshi_1232 0.64 -0.4 1,275,821 + Dshi_1232 0.64 +1.1 1,275,844 + Dshi_1232 0.69 +0.2 1,275,860 - Dshi_1232 0.72 -0.4 1,275,879 + +1.5 1,275,887 - Dshi_1232 0.78 -1.6 1,275,948 - -0.9 1,275,976 + +0.2 1,276,009 + -1.1 1,276,168 + -1.1 1,276,314 + Dshi_1233 0.12 -0.8 1,276,337 - Dshi_1233 0.13 +0.1 1,276,338 - Dshi_1233 0.13 +0.3 1,276,479 + Dshi_1233 0.22 -0.5 1,276,502 - Dshi_1233 0.23 -2.5 1,276,528 + Dshi_1233 0.25 -2.4 1,276,600 - Dshi_1233 0.29 +0.8 1,276,600 - Dshi_1233 0.29 -1.0 1,276,639 + Dshi_1233 0.32 -1.3 1,276,639 + Dshi_1233 0.32 -1.6 1,277,214 + Dshi_1233 0.67 -1.8 1,277,458 - Dshi_1233 0.82 +0.2 1,277,493 - Dshi_1233 0.85 -0.4 1,277,560 + Dshi_1233 0.89 -0.5 1,277,568 - Dshi_1233 0.89 -0.5 1,277,621 - -0.8 1,277,621 - -0.5 1,277,621 - -2.7 1,277,911 + Dshi_1234 0.10 -1.4 1,277,911 + Dshi_1234 0.10 -0.0 1,277,919 - Dshi_1234 0.11 -0.5 1,277,919 - Dshi_1234 0.11 -0.2 1,277,933 + Dshi_1234 0.12 -1.6 1,278,096 + Dshi_1234 0.23 -0.7 1,278,096 + Dshi_1234 0.23 -0.9 1,278,194 - Dshi_1234 0.29 -2.7 1,278,451 + Dshi_1234 0.46 -0.3 1,278,488 - Dshi_1234 0.49 -0.1 1,278,488 - Dshi_1234 0.49 +0.2
Or see this region's nucleotide sequence