Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1192
Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Thallium(I) acetate 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,229,189 | - | Dshi_1191 | 0.43 | +0.2 | |
1,229,231 | - | Dshi_1191 | 0.46 | +0.1 | |
1,229,235 | + | Dshi_1191 | 0.46 | +0.7 | |
1,229,235 | + | Dshi_1191 | 0.46 | +1.2 | |
1,229,235 | + | Dshi_1191 | 0.46 | -1.0 | |
1,229,315 | + | Dshi_1191 | 0.51 | -1.2 | |
1,229,383 | - | Dshi_1191 | 0.56 | +0.1 | |
1,229,527 | + | Dshi_1191 | 0.66 | +0.2 | |
1,229,600 | - | Dshi_1191 | 0.71 | -0.8 | |
1,229,931 | + | +0.5 | |||
1,229,931 | + | -0.3 | |||
1,230,178 | + | Dshi_1192 | 0.31 | -0.6 | |
1,230,269 | - | Dshi_1192 | 0.51 | -2.0 | |
1,230,290 | + | Dshi_1192 | 0.56 | -0.7 | |
1,230,561 | - | -0.4 | |||
1,231,037 | + | Dshi_1193 | 0.26 | -0.1 | |
1,231,037 | + | Dshi_1193 | 0.26 | -0.2 | |
1,231,039 | + | Dshi_1193 | 0.26 | +0.2 | |
1,231,073 | + | Dshi_1193 | 0.29 | -0.3 | |
1,231,092 | - | Dshi_1193 | 0.30 | -0.0 | |
1,231,112 | + | Dshi_1193 | 0.32 | -0.2 | |
1,231,140 | - | Dshi_1193 | 0.34 | +0.3 | |
1,231,163 | + | Dshi_1193 | 0.36 | -0.4 | |
1,231,169 | + | Dshi_1193 | 0.37 | -0.4 | |
1,231,418 | - | Dshi_1193 | 0.58 | -1.0 | |
1,231,450 | - | Dshi_1193 | 0.61 | -0.1 |
Or see this region's nucleotide sequence