Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1079
Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | m.b. Thallium(I) acetate 0.004 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,106,176 | - | Dshi_1078 | 0.15 | -0.9 | |
| 1,106,213 | + | Dshi_1078 | 0.19 | +0.6 | |
| 1,106,213 | + | Dshi_1078 | 0.19 | -0.1 | |
| 1,106,311 | - | Dshi_1078 | 0.28 | -2.8 | |
| 1,106,456 | + | Dshi_1078 | 0.42 | +0.4 | |
| 1,106,598 | - | Dshi_1078 | 0.56 | +0.3 | |
| 1,106,899 | + | Dshi_1078 | 0.85 | -1.5 | |
| 1,107,006 | - | +0.1 | |||
| 1,107,132 | - | +0.3 | |||
| 1,107,229 | + | Dshi_1079 | 0.24 | +0.2 | |
| 1,107,601 | - | Dshi_1079 | 0.80 | -1.0 | |
| 1,108,082 | - | Dshi_1080 | 0.15 | -2.8 | |
| 1,108,146 | - | Dshi_1080 | 0.19 | -1.7 | |
| 1,108,467 | + | Dshi_1080 | 0.37 | -1.8 | |
| 1,108,647 | - | Dshi_1080 | 0.48 | -1.8 | |
| 1,108,697 | + | Dshi_1080 | 0.50 | -0.3 | |
| 1,108,718 | + | Dshi_1080 | 0.52 | +1.6 |
Or see this region's nucleotide sequence