Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1074 and Dshi_1075 are separated by 302 nucleotides Dshi_1075 and Dshi_1076 are separated by 175 nucleotides Dshi_1076 and Dshi_1077 are separated by 136 nucleotides Dshi_1077 and Dshi_1078 overlap by 1 nucleotides
Dshi_1074: Dshi_1074 - homocysteine S-methyltransferase (RefSeq), at 1,103,070 to 1,104,095
_1074
Dshi_1075: Dshi_1075 - protein of unknown function DUF1476 (RefSeq), at 1,104,398 to 1,104,712
_1075
Dshi_1076: Dshi_1076 - phosphoribosylaminoimidazole-succinocarboxamidesynthase (RefSeq), at 1,104,888 to 1,105,649
_1076
Dshi_1077: Dshi_1077 - phosphoribosylformylglycinamidine synthase, purS (RefSeq), at 1,105,786 to 1,106,016
_1077
Dshi_1078: Dshi_1078 - Alcohol dehydrogenase zinc-binding domain protein (RefSeq), at 1,106,016 to 1,107,053
_1078
Position (kb)
1104
1105
1106 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1104.207 kb on - strand at 1104.542 kb on - strand, within Dshi_1075 at 1104.639 kb on + strand, within Dshi_1075 at 1104.710 kb on + strand at 1104.715 kb on - strand at 1104.743 kb on + strand at 1104.751 kb on - strand at 1104.751 kb on - strand at 1104.763 kb on + strand at 1104.769 kb on - strand at 1104.771 kb on - strand at 1104.829 kb on - strand at 1104.857 kb on + strand at 1104.870 kb on - strand at 1105.221 kb on + strand, within Dshi_1076 at 1105.283 kb on - strand, within Dshi_1076 at 1105.923 kb on + strand, within Dshi_1077 at 1106.005 kb on + strand at 1106.065 kb on - strand at 1106.176 kb on - strand, within Dshi_1078 at 1106.213 kb on + strand, within Dshi_1078 at 1106.213 kb on + strand, within Dshi_1078 at 1106.311 kb on - strand, within Dshi_1078 at 1106.456 kb on + strand, within Dshi_1078 at 1106.598 kb on - strand, within Dshi_1078
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 1,104,207 - -0.7 1,104,542 - Dshi_1075 0.46 +0.1 1,104,639 + Dshi_1075 0.77 +0.5 1,104,710 + -1.0 1,104,715 - -0.4 1,104,743 + -0.2 1,104,751 - -0.9 1,104,751 - +1.1 1,104,763 + -1.1 1,104,769 - +0.4 1,104,771 - -0.6 1,104,829 - -0.1 1,104,857 + +1.0 1,104,870 - -1.2 1,105,221 + Dshi_1076 0.44 -0.8 1,105,283 - Dshi_1076 0.52 +0.1 1,105,923 + Dshi_1077 0.59 -0.0 1,106,005 + -0.4 1,106,065 - +1.4 1,106,176 - Dshi_1078 0.15 -0.9 1,106,213 + Dshi_1078 0.19 +0.6 1,106,213 + Dshi_1078 0.19 -0.1 1,106,311 - Dshi_1078 0.28 -2.8 1,106,456 + Dshi_1078 0.42 +0.4 1,106,598 - Dshi_1078 0.56 +0.3
Or see this region's nucleotide sequence