Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0959 and Dshi_0960 are separated by 202 nucleotides Dshi_0960 and Dshi_0961 are separated by 115 nucleotides
Dshi_0959: Dshi_0959 - transcriptional regulator, RpiR family (RefSeq), at 983,690 to 984,535
_0959
Dshi_0960: Dshi_0960 - transcriptional regulator, GntR family (RefSeq), at 984,738 to 985,418
_0960
Dshi_0961: Dshi_0961 - Catechol dioxygenase domain protein (RefSeq), at 985,534 to 986,037
_0961
Position (kb)
985
986
987 Strain fitness (log2 ratio)
-1
0
1
2 at 984.722 kb on + strand at 984.730 kb on - strand at 984.856 kb on - strand, within Dshi_0960 at 984.931 kb on + strand, within Dshi_0960 at 984.939 kb on - strand, within Dshi_0960 at 984.972 kb on - strand, within Dshi_0960 at 985.038 kb on + strand, within Dshi_0960 at 985.065 kb on - strand, within Dshi_0960 at 985.072 kb on - strand, within Dshi_0960 at 985.172 kb on - strand, within Dshi_0960 at 985.292 kb on + strand, within Dshi_0960 at 985.334 kb on - strand, within Dshi_0960 at 985.389 kb on + strand at 985.460 kb on - strand at 985.497 kb on - strand at 985.502 kb on + strand at 985.522 kb on + strand at 985.619 kb on + strand, within Dshi_0961 at 985.676 kb on + strand, within Dshi_0961 at 985.676 kb on + strand, within Dshi_0961 at 985.678 kb on + strand, within Dshi_0961 at 985.693 kb on - strand, within Dshi_0961 at 985.780 kb on - strand, within Dshi_0961 at 985.790 kb on + strand, within Dshi_0961 at 985.836 kb on + strand, within Dshi_0961 at 985.880 kb on + strand, within Dshi_0961 at 985.939 kb on + strand, within Dshi_0961 at 985.948 kb on + strand, within Dshi_0961 at 985.957 kb on - strand, within Dshi_0961 at 986.074 kb on - strand at 986.271 kb on + strand at 986.279 kb on - strand at 986.465 kb on - strand at 986.582 kb on + strand at 986.625 kb on + strand at 986.632 kb on - strand at 986.942 kb on - strand at 986.994 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 984,722 + +0.4 984,730 - +0.3 984,856 - Dshi_0960 0.17 -0.5 984,931 + Dshi_0960 0.28 -0.2 984,939 - Dshi_0960 0.30 +1.0 984,972 - Dshi_0960 0.34 +1.3 985,038 + Dshi_0960 0.44 +0.1 985,065 - Dshi_0960 0.48 +0.2 985,072 - Dshi_0960 0.49 -0.1 985,172 - Dshi_0960 0.64 +1.0 985,292 + Dshi_0960 0.81 +0.1 985,334 - Dshi_0960 0.88 -1.1 985,389 + -0.7 985,460 - -0.1 985,497 - +1.1 985,502 + +0.1 985,522 + -1.0 985,619 + Dshi_0961 0.17 -0.2 985,676 + Dshi_0961 0.28 +1.8 985,676 + Dshi_0961 0.28 +1.0 985,678 + Dshi_0961 0.29 -0.4 985,693 - Dshi_0961 0.32 +0.2 985,780 - Dshi_0961 0.49 +0.6 985,790 + Dshi_0961 0.51 +0.4 985,836 + Dshi_0961 0.60 +0.8 985,880 + Dshi_0961 0.69 +0.2 985,939 + Dshi_0961 0.80 +0.6 985,948 + Dshi_0961 0.82 -1.7 985,957 - Dshi_0961 0.84 +0.5 986,074 - -1.3 986,271 + +0.6 986,279 - -0.0 986,465 - +0.6 986,582 + +0.0 986,625 + +0.4 986,632 - -0.9 986,942 - -0.5 986,994 + +0.5
Or see this region's nucleotide sequence