Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0946 and Dshi_0947 are separated by 57 nucleotides Dshi_0947 and Dshi_0948 are separated by 129 nucleotides Dshi_0948 and Dshi_0949 are separated by 51 nucleotides Dshi_0949 and Dshi_0950 are separated by 109 nucleotides
Dshi_0946: Dshi_0946 - hypothetical protein (RefSeq), at 971,323 to 971,721
_0946
Dshi_0947: Dshi_0947 - Aminoacyl-tRNA hydrolase (RefSeq), at 971,779 to 972,486
_0947
Dshi_0948: Dshi_0948 - L-lactate dehydrogenase (cytochrome) (RefSeq), at 972,616 to 973,788
_0948
Dshi_0949: Dshi_0949 - hypothetical protein (RefSeq), at 973,840 to 974,457
_0949
Dshi_0950: Dshi_0950 - ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 (RefSeq), at 974,567 to 975,202
_0950
Position (kb) 972
973
974 Strain fitness (log2 ratio) -1
0
1
2
3 at 971.658 kb on + strand, within Dshi_0946 at 971.663 kb on + strand, within Dshi_0946 at 971.668 kb on + strand, within Dshi_0946 at 971.668 kb on + strand, within Dshi_0946 at 971.668 kb on + strand, within Dshi_0946 at 971.668 kb on + strand, within Dshi_0946 at 971.668 kb on + strand, within Dshi_0946 at 971.671 kb on - strand, within Dshi_0946 at 971.673 kb on + strand, within Dshi_0946 at 971.691 kb on - strand at 971.738 kb on - strand at 971.770 kb on + strand at 971.778 kb on - strand at 971.788 kb on - strand at 971.903 kb on - strand, within Dshi_0947 at 972.742 kb on - strand, within Dshi_0948 at 972.747 kb on - strand, within Dshi_0948 at 972.815 kb on + strand, within Dshi_0948 at 972.815 kb on + strand, within Dshi_0948 at 972.823 kb on - strand, within Dshi_0948 at 972.823 kb on - strand, within Dshi_0948 at 972.823 kb on - strand, within Dshi_0948 at 972.838 kb on + strand, within Dshi_0948 at 972.846 kb on - strand, within Dshi_0948 at 972.885 kb on + strand, within Dshi_0948 at 972.893 kb on - strand, within Dshi_0948 at 972.922 kb on + strand, within Dshi_0948 at 972.930 kb on - strand, within Dshi_0948 at 972.930 kb on - strand, within Dshi_0948 at 972.975 kb on + strand, within Dshi_0948 at 972.975 kb on + strand, within Dshi_0948 at 972.977 kb on + strand, within Dshi_0948 at 972.983 kb on - strand, within Dshi_0948 at 972.985 kb on - strand, within Dshi_0948 at 973.064 kb on + strand, within Dshi_0948 at 973.064 kb on - strand, within Dshi_0948 at 973.090 kb on - strand, within Dshi_0948 at 973.090 kb on - strand, within Dshi_0948 at 973.090 kb on - strand, within Dshi_0948 at 973.097 kb on + strand, within Dshi_0948 at 973.203 kb on - strand at 973.248 kb on + strand, within Dshi_0948 at 973.256 kb on - strand, within Dshi_0948 at 973.256 kb on - strand, within Dshi_0948 at 973.265 kb on + strand, within Dshi_0948 at 973.273 kb on - strand, within Dshi_0948 at 973.288 kb on - strand, within Dshi_0948 at 973.373 kb on - strand, within Dshi_0948 at 973.385 kb on - strand, within Dshi_0948 at 973.494 kb on + strand, within Dshi_0948 at 973.608 kb on + strand, within Dshi_0948 at 973.616 kb on - strand, within Dshi_0948 at 973.616 kb on - strand, within Dshi_0948 at 973.741 kb on - strand at 973.889 kb on - strand at 973.889 kb on - strand at 973.903 kb on - strand, within Dshi_0949 at 974.001 kb on - strand, within Dshi_0949 at 974.013 kb on + strand, within Dshi_0949 at 974.070 kb on + strand, within Dshi_0949 at 974.168 kb on + strand, within Dshi_0949 at 974.235 kb on + strand, within Dshi_0949 at 974.243 kb on - strand, within Dshi_0949 at 974.413 kb on + strand at 974.439 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 971,658 + Dshi_0946 0.84 -1.3 971,663 + Dshi_0946 0.85 +0.1 971,668 + Dshi_0946 0.86 -0.0 971,668 + Dshi_0946 0.86 -0.6 971,668 + Dshi_0946 0.86 +1.2 971,668 + Dshi_0946 0.86 -0.6 971,668 + Dshi_0946 0.86 +0.8 971,671 - Dshi_0946 0.87 +0.3 971,673 + Dshi_0946 0.88 +0.0 971,691 - +0.0 971,738 - +0.5 971,770 + +1.0 971,778 - +2.5 971,788 - -1.0 971,903 - Dshi_0947 0.18 -0.3 972,742 - Dshi_0948 0.11 +2.4 972,747 - Dshi_0948 0.11 +1.3 972,815 + Dshi_0948 0.17 +2.5 972,815 + Dshi_0948 0.17 +2.3 972,823 - Dshi_0948 0.18 +1.8 972,823 - Dshi_0948 0.18 +1.7 972,823 - Dshi_0948 0.18 +2.2 972,838 + Dshi_0948 0.19 +3.2 972,846 - Dshi_0948 0.20 +2.6 972,885 + Dshi_0948 0.23 +2.5 972,893 - Dshi_0948 0.24 +1.9 972,922 + Dshi_0948 0.26 +2.3 972,930 - Dshi_0948 0.27 +1.7 972,930 - Dshi_0948 0.27 +2.2 972,975 + Dshi_0948 0.31 +3.0 972,975 + Dshi_0948 0.31 +1.0 972,977 + Dshi_0948 0.31 +2.7 972,983 - Dshi_0948 0.31 +2.6 972,985 - Dshi_0948 0.31 +1.9 973,064 + Dshi_0948 0.38 +2.0 973,064 - Dshi_0948 0.38 +1.6 973,090 - Dshi_0948 0.40 +1.9 973,090 - Dshi_0948 0.40 +2.7 973,090 - Dshi_0948 0.40 +1.9 973,097 + Dshi_0948 0.41 +2.0 973,203 - +2.4 973,248 + Dshi_0948 0.54 +2.7 973,256 - Dshi_0948 0.55 +2.1 973,256 - Dshi_0948 0.55 +2.1 973,265 + Dshi_0948 0.55 +2.2 973,273 - Dshi_0948 0.56 +1.0 973,288 - Dshi_0948 0.57 +3.0 973,373 - Dshi_0948 0.65 +1.9 973,385 - Dshi_0948 0.66 +2.5 973,494 + Dshi_0948 0.75 +1.7 973,608 + Dshi_0948 0.85 +2.0 973,616 - Dshi_0948 0.85 +1.7 973,616 - Dshi_0948 0.85 +1.7 973,741 - +2.0 973,889 - +0.3 973,889 - +0.7 973,903 - Dshi_0949 0.10 +1.0 974,001 - Dshi_0949 0.26 +0.3 974,013 + Dshi_0949 0.28 +0.1 974,070 + Dshi_0949 0.37 -1.3 974,168 + Dshi_0949 0.53 +0.3 974,235 + Dshi_0949 0.64 -0.4 974,243 - Dshi_0949 0.65 +0.1 974,413 + +1.2 974,439 - -0.8
Or see this region's nucleotide sequence