Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0868 and Dshi_0869 are separated by 11 nucleotides Dshi_0869 and Dshi_0870 are separated by 11 nucleotides
Dshi_0868: Dshi_0868 - putative peptidase (RefSeq), at 883,631 to 885,007
_0868
Dshi_0869: Dshi_0869 - hypothetical protein (RefSeq), at 885,019 to 885,909
_0869
Dshi_0870: Dshi_0870 - transcriptional regulator, SARP family (RefSeq), at 885,921 to 887,960
_0870
Position (kb) 885
886 Strain fitness (log2 ratio) -2
-1
0
1
2 at 884.041 kb on - strand, within Dshi_0868 at 884.124 kb on - strand, within Dshi_0868 at 884.266 kb on + strand, within Dshi_0868 at 884.272 kb on - strand, within Dshi_0868 at 884.419 kb on - strand, within Dshi_0868 at 884.501 kb on - strand, within Dshi_0868 at 884.544 kb on + strand, within Dshi_0868 at 884.563 kb on - strand, within Dshi_0868 at 884.705 kb on + strand, within Dshi_0868 at 884.732 kb on - strand, within Dshi_0868 at 884.742 kb on - strand, within Dshi_0868 at 884.748 kb on + strand, within Dshi_0868 at 884.960 kb on + strand at 885.129 kb on - strand, within Dshi_0869 at 885.130 kb on - strand, within Dshi_0869 at 885.141 kb on + strand, within Dshi_0869 at 885.226 kb on + strand, within Dshi_0869 at 885.238 kb on + strand, within Dshi_0869 at 885.306 kb on + strand, within Dshi_0869 at 885.564 kb on - strand, within Dshi_0869 at 885.569 kb on - strand, within Dshi_0869 at 885.611 kb on + strand, within Dshi_0869 at 885.753 kb on - strand, within Dshi_0869 at 885.774 kb on - strand, within Dshi_0869 at 885.774 kb on - strand, within Dshi_0869 at 885.913 kb on - strand at 885.953 kb on - strand at 886.001 kb on + strand at 886.009 kb on - strand at 886.058 kb on - strand at 886.077 kb on - strand at 886.081 kb on + strand at 886.087 kb on - strand at 886.249 kb on - strand, within Dshi_0870 at 886.264 kb on + strand, within Dshi_0870 at 886.273 kb on + strand, within Dshi_0870 at 886.505 kb on - strand, within Dshi_0870 at 886.531 kb on - strand, within Dshi_0870 at 886.531 kb on - strand, within Dshi_0870 at 886.532 kb on - strand, within Dshi_0870 at 886.550 kb on + strand, within Dshi_0870 at 886.563 kb on - strand, within Dshi_0870 at 886.622 kb on - strand, within Dshi_0870 at 886.632 kb on - strand, within Dshi_0870 at 886.634 kb on + strand, within Dshi_0870 at 886.767 kb on - strand, within Dshi_0870 at 886.790 kb on + strand, within Dshi_0870 at 886.800 kb on + strand, within Dshi_0870 at 886.808 kb on - strand, within Dshi_0870 at 886.808 kb on - strand, within Dshi_0870 at 886.810 kb on + strand, within Dshi_0870 at 886.870 kb on - strand, within Dshi_0870 at 886.871 kb on - strand, within Dshi_0870 at 886.888 kb on - strand, within Dshi_0870 at 886.888 kb on - strand, within Dshi_0870 at 886.888 kb on - strand at 886.899 kb on + strand, within Dshi_0870
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 884,041 - Dshi_0868 0.30 +0.4 884,124 - Dshi_0868 0.36 +0.4 884,266 + Dshi_0868 0.46 +0.5 884,272 - Dshi_0868 0.47 -1.1 884,419 - Dshi_0868 0.57 -0.0 884,501 - Dshi_0868 0.63 +0.1 884,544 + Dshi_0868 0.66 -0.4 884,563 - Dshi_0868 0.68 -0.9 884,705 + Dshi_0868 0.78 -0.9 884,732 - Dshi_0868 0.80 +1.4 884,742 - Dshi_0868 0.81 -0.2 884,748 + Dshi_0868 0.81 -1.3 884,960 + +0.4 885,129 - Dshi_0869 0.12 -0.3 885,130 - Dshi_0869 0.12 +1.0 885,141 + Dshi_0869 0.14 +0.4 885,226 + Dshi_0869 0.23 -0.5 885,238 + Dshi_0869 0.25 +0.4 885,306 + Dshi_0869 0.32 -0.4 885,564 - Dshi_0869 0.61 -1.3 885,569 - Dshi_0869 0.62 -0.2 885,611 + Dshi_0869 0.66 -1.6 885,753 - Dshi_0869 0.82 -0.6 885,774 - Dshi_0869 0.85 -1.9 885,774 - Dshi_0869 0.85 -2.5 885,913 - +0.7 885,953 - +0.3 886,001 + -0.7 886,009 - -0.2 886,058 - +1.4 886,077 - -0.9 886,081 + +0.5 886,087 - +0.1 886,249 - Dshi_0870 0.16 +0.5 886,264 + Dshi_0870 0.17 +1.6 886,273 + Dshi_0870 0.17 +0.7 886,505 - Dshi_0870 0.29 +0.3 886,531 - Dshi_0870 0.30 -0.1 886,531 - Dshi_0870 0.30 -0.3 886,532 - Dshi_0870 0.30 -0.4 886,550 + Dshi_0870 0.31 -0.2 886,563 - Dshi_0870 0.31 +1.1 886,622 - Dshi_0870 0.34 -0.9 886,632 - Dshi_0870 0.35 -0.2 886,634 + Dshi_0870 0.35 +0.2 886,767 - Dshi_0870 0.41 +0.3 886,790 + Dshi_0870 0.43 -0.7 886,800 + Dshi_0870 0.43 +0.6 886,808 - Dshi_0870 0.43 +1.9 886,808 - Dshi_0870 0.43 +0.3 886,810 + Dshi_0870 0.44 +0.3 886,870 - Dshi_0870 0.47 -1.1 886,871 - Dshi_0870 0.47 +0.2 886,888 - Dshi_0870 0.47 +0.3 886,888 - Dshi_0870 0.47 -1.2 886,888 - -1.6 886,899 + Dshi_0870 0.48 -0.1
Or see this region's nucleotide sequence