Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_0760

Experiment: m.b. Thallium(I) acetate 0.004 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDshi_0758 and Dshi_0759 are separated by 82 nucleotidesDshi_0759 and Dshi_0760 are separated by 501 nucleotidesDshi_0760 and Dshi_0761 are separated by 26 nucleotidesDshi_0761 and Dshi_0762 are separated by 7 nucleotides Dshi_0758: Dshi_0758 - transcriptional regulator, MarR family (RefSeq), at 768,813 to 769,301 _0758 Dshi_0759: Dshi_0759 - hypothetical protein (RefSeq), at 769,384 to 769,752 _0759 Dshi_0760: Dshi_0760 - hypothetical protein (RefSeq), at 770,254 to 770,736 _0760 Dshi_0761: Dshi_0761 - hypothetical protein (RefSeq), at 770,763 to 771,179 _0761 Dshi_0762: Dshi_0762 - aminotransferase class I and II (RefSeq), at 771,187 to 772,389 _0762 Position (kb) 770 771Strain fitness (log2 ratio) -1 0 1at 769.312 kb on + strandat 769.339 kb on + strandat 769.349 kb on + strandat 769.368 kb on - strandat 769.541 kb on + strand, within Dshi_0759at 769.551 kb on - strand, within Dshi_0759at 769.551 kb on - strand, within Dshi_0759at 769.556 kb on + strand, within Dshi_0759at 769.568 kb on + strand, within Dshi_0759at 769.618 kb on - strand, within Dshi_0759at 769.699 kb on + strand, within Dshi_0759at 770.344 kb on + strand, within Dshi_0760at 770.539 kb on - strand, within Dshi_0760at 770.582 kb on - strand, within Dshi_0760at 770.673 kb on - strand, within Dshi_0760at 770.673 kb on - strand, within Dshi_0760at 770.916 kb on - strand, within Dshi_0761at 771.140 kb on + strandat 771.185 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml
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769,312 + -0.3
769,339 + +0.6
769,349 + -0.5
769,368 - +0.1
769,541 + Dshi_0759 0.43 -0.9
769,551 - Dshi_0759 0.45 -0.9
769,551 - Dshi_0759 0.45 +0.4
769,556 + Dshi_0759 0.47 +0.8
769,568 + Dshi_0759 0.50 +0.2
769,618 - Dshi_0759 0.63 +0.8
769,699 + Dshi_0759 0.85 +0.7
770,344 + Dshi_0760 0.19 -0.9
770,539 - Dshi_0760 0.59 -0.3
770,582 - Dshi_0760 0.68 -0.8
770,673 - Dshi_0760 0.87 -0.0
770,673 - Dshi_0760 0.87 -1.6
770,916 - Dshi_0761 0.37 +0.2
771,140 + -0.2
771,185 + -0.3

Or see this region's nucleotide sequence