Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0678 and Dshi_0679 are separated by 8 nucleotides Dshi_0679 and Dshi_0680 are separated by 119 nucleotides Dshi_0680 and Dshi_0681 overlap by 8 nucleotides Dshi_0681 and Dshi_0682 are separated by 76 nucleotides Dshi_0682 and Dshi_0683 are separated by 176 nucleotides
Dshi_0678: Dshi_0678 - glycosyl transferase family 14 (RefSeq), at 684,684 to 686,261
_0678
Dshi_0679: Dshi_0679 - histidine triad (HIT) protein (RefSeq), at 686,270 to 686,641
_0679
Dshi_0680: Dshi_0680 - phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq), at 686,761 to 687,834
_0680
Dshi_0681: Dshi_0681 - phosphoribosylaminoimidazole carboxylase, catalytic subunit (RefSeq), at 687,827 to 688,312
_0681
Dshi_0682: Dshi_0682 - protein of unknown function DUF465 (RefSeq), at 688,389 to 688,613
_0682
Dshi_0683: Dshi_0683 - heat shock protein Hsp20 (RefSeq), at 688,790 to 689,233
_0683
Position (kb) 686
687
688 Strain fitness (log2 ratio) -2
-1
0
1
2 at 685.932 kb on + strand, within Dshi_0678 at 686.194 kb on - strand at 686.275 kb on - strand at 686.277 kb on + strand at 686.407 kb on - strand, within Dshi_0679 at 686.420 kb on + strand, within Dshi_0679 at 686.533 kb on + strand, within Dshi_0679 at 686.609 kb on + strand at 686.634 kb on - strand at 687.152 kb on - strand, within Dshi_0680 at 688.374 kb on + strand at 688.492 kb on - strand, within Dshi_0682 at 688.657 kb on + strand at 688.681 kb on - strand at 688.684 kb on + strand at 688.692 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 685,932 + Dshi_0678 0.79 +0.7 686,194 - +0.4 686,275 - +2.7 686,277 + -1.1 686,407 - Dshi_0679 0.37 -1.9 686,420 + Dshi_0679 0.40 +0.8 686,533 + Dshi_0679 0.71 +0.6 686,609 + +0.5 686,634 - -0.4 687,152 - Dshi_0680 0.36 -0.5 688,374 + +1.1 688,492 - Dshi_0682 0.46 -0.7 688,657 + +0.2 688,681 - +0.3 688,684 + +0.5 688,692 - +0.1
Or see this region's nucleotide sequence