Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0661 and Dshi_0662 are separated by 14 nucleotides Dshi_0662 and Dshi_0663 are separated by 12 nucleotides Dshi_0663 and Dshi_0664 overlap by 4 nucleotides Dshi_0664 and Dshi_0665 are separated by 315 nucleotides
Dshi_0661: Dshi_0661 - cytochrome c oxidase, cbb3-type, subunit I (RefSeq), at 665,449 to 667,050
_0661
Dshi_0662: Dshi_0662 - cytochrome c oxidase, cbb3-type, subunit II (RefSeq), at 667,065 to 667,790
_0662
Dshi_0663: Dshi_0663 - Cbb3-type cytochrome oxidase component (RefSeq), at 667,803 to 668,036
_0663
Dshi_0664: Dshi_0664 - cytochrome c oxidase, cbb3-type, subunit III (RefSeq), at 668,033 to 668,896
_0664
Dshi_0665: Dshi_0665 - Cytochrome c oxidase cbb3 type accessory protein FixG (RefSeq), at 669,212 to 670,654
_0665
Position (kb) 668
669 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 667.081 kb on + strand at 667.081 kb on + strand at 667.172 kb on + strand, within Dshi_0662 at 667.185 kb on - strand, within Dshi_0662 at 667.248 kb on + strand at 667.255 kb on - strand, within Dshi_0662 at 667.317 kb on - strand, within Dshi_0662 at 667.350 kb on + strand, within Dshi_0662 at 667.407 kb on - strand, within Dshi_0662 at 667.414 kb on - strand, within Dshi_0662 at 667.418 kb on + strand, within Dshi_0662 at 667.576 kb on - strand, within Dshi_0662 at 667.581 kb on - strand, within Dshi_0662 at 667.613 kb on + strand, within Dshi_0662 at 667.690 kb on - strand, within Dshi_0662 at 667.807 kb on - strand at 667.886 kb on + strand, within Dshi_0663 at 667.894 kb on - strand, within Dshi_0663 at 667.988 kb on + strand, within Dshi_0663 at 668.023 kb on - strand at 668.030 kb on + strand at 668.110 kb on - strand at 668.158 kb on - strand, within Dshi_0664 at 668.167 kb on + strand, within Dshi_0664 at 668.277 kb on - strand, within Dshi_0664 at 668.277 kb on - strand, within Dshi_0664 at 668.352 kb on - strand, within Dshi_0664 at 668.378 kb on + strand, within Dshi_0664 at 668.391 kb on + strand, within Dshi_0664 at 668.409 kb on + strand, within Dshi_0664 at 668.409 kb on - strand, within Dshi_0664 at 668.436 kb on + strand, within Dshi_0664 at 668.461 kb on + strand, within Dshi_0664 at 668.461 kb on + strand, within Dshi_0664 at 668.602 kb on - strand, within Dshi_0664 at 668.606 kb on + strand, within Dshi_0664 at 668.699 kb on - strand, within Dshi_0664 at 668.836 kb on + strand at 668.863 kb on + strand at 668.878 kb on - strand at 668.921 kb on + strand at 668.936 kb on + strand at 668.949 kb on + strand at 668.958 kb on - strand at 669.142 kb on - strand at 669.151 kb on + strand at 669.159 kb on - strand at 669.316 kb on + strand at 669.331 kb on + strand at 669.344 kb on + strand at 669.431 kb on + strand, within Dshi_0665 at 669.435 kb on + strand, within Dshi_0665 at 669.483 kb on - strand, within Dshi_0665 at 669.486 kb on + strand, within Dshi_0665 at 669.486 kb on + strand, within Dshi_0665 at 669.494 kb on - strand, within Dshi_0665 at 669.494 kb on - strand, within Dshi_0665 at 669.512 kb on + strand, within Dshi_0665 at 669.518 kb on + strand, within Dshi_0665 at 669.563 kb on + strand, within Dshi_0665 at 669.571 kb on - strand, within Dshi_0665 at 669.586 kb on - strand, within Dshi_0665
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 667,081 + -0.1 667,081 + -1.1 667,172 + Dshi_0662 0.15 +0.5 667,185 - Dshi_0662 0.17 -0.1 667,248 + -0.6 667,255 - Dshi_0662 0.26 +1.5 667,317 - Dshi_0662 0.35 -2.5 667,350 + Dshi_0662 0.39 +0.1 667,407 - Dshi_0662 0.47 -0.0 667,414 - Dshi_0662 0.48 +0.9 667,418 + Dshi_0662 0.49 -1.7 667,576 - Dshi_0662 0.70 +0.8 667,581 - Dshi_0662 0.71 -0.3 667,613 + Dshi_0662 0.75 +0.2 667,690 - Dshi_0662 0.86 -0.4 667,807 - +1.1 667,886 + Dshi_0663 0.35 -1.4 667,894 - Dshi_0663 0.39 -0.2 667,988 + Dshi_0663 0.79 +0.3 668,023 - -0.3 668,030 + +0.5 668,110 - +1.1 668,158 - Dshi_0664 0.14 +1.5 668,167 + Dshi_0664 0.16 +1.7 668,277 - Dshi_0664 0.28 +1.4 668,277 - Dshi_0664 0.28 +0.5 668,352 - Dshi_0664 0.37 +0.1 668,378 + Dshi_0664 0.40 +1.2 668,391 + Dshi_0664 0.41 +0.6 668,409 + Dshi_0664 0.44 +0.5 668,409 - Dshi_0664 0.44 +0.8 668,436 + Dshi_0664 0.47 +1.2 668,461 + Dshi_0664 0.50 +2.7 668,461 + Dshi_0664 0.50 +0.1 668,602 - Dshi_0664 0.66 +0.5 668,606 + Dshi_0664 0.66 +0.3 668,699 - Dshi_0664 0.77 +0.7 668,836 + +0.1 668,863 + -0.5 668,878 - +0.6 668,921 + -0.3 668,936 + +0.1 668,949 + +0.5 668,958 - +0.0 669,142 - +0.2 669,151 + +1.1 669,159 - +1.4 669,316 + -0.6 669,331 + +1.3 669,344 + +2.2 669,431 + Dshi_0665 0.15 +2.2 669,435 + Dshi_0665 0.15 +3.3 669,483 - Dshi_0665 0.19 +1.1 669,486 + Dshi_0665 0.19 +1.4 669,486 + Dshi_0665 0.19 -0.6 669,494 - Dshi_0665 0.20 +2.2 669,494 - Dshi_0665 0.20 +1.0 669,512 + Dshi_0665 0.21 +1.6 669,518 + Dshi_0665 0.21 +2.9 669,563 + Dshi_0665 0.24 +2.2 669,571 - Dshi_0665 0.25 -0.1 669,586 - Dshi_0665 0.26 +2.0
Or see this region's nucleotide sequence