Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0490 and Dshi_0491 are separated by 142 nucleotides
Dshi_0490: Dshi_0490 - hypothetical protein (RefSeq), at 475,571 to 475,996
_0490
Dshi_0491: Dshi_0491 - putative sulfonate/nitrate transport system substrate-binding protein (RefSeq), at 476,139 to 477,122
_0491
Position (kb)
475
476 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 474.575 kb on + strand at 474.575 kb on + strand at 474.575 kb on + strand at 474.575 kb on + strand at 474.583 kb on - strand at 474.583 kb on - strand at 474.583 kb on - strand at 474.611 kb on + strand at 474.614 kb on - strand at 474.615 kb on - strand at 474.651 kb on - strand at 474.651 kb on - strand at 474.676 kb on + strand at 474.678 kb on - strand at 474.694 kb on - strand at 474.696 kb on - strand at 474.696 kb on - strand at 474.699 kb on + strand at 474.707 kb on - strand at 474.707 kb on - strand at 474.707 kb on - strand at 474.707 kb on - strand at 474.710 kb on + strand at 474.718 kb on - strand at 474.723 kb on + strand at 474.765 kb on + strand at 474.768 kb on - strand at 474.768 kb on - strand at 474.771 kb on + strand at 474.778 kb on + strand at 474.792 kb on - strand at 474.799 kb on - strand at 474.801 kb on + strand at 474.806 kb on - strand at 474.809 kb on - strand at 474.811 kb on + strand at 474.816 kb on + strand at 474.816 kb on + strand at 474.826 kb on + strand at 474.826 kb on + strand at 474.827 kb on + strand at 474.837 kb on - strand at 474.852 kb on - strand at 474.860 kb on + strand at 474.875 kb on + strand at 474.880 kb on + strand at 474.883 kb on - strand at 474.908 kb on + strand at 474.910 kb on - strand at 474.916 kb on - strand at 474.916 kb on - strand at 474.922 kb on - strand at 474.922 kb on - strand at 474.939 kb on + strand at 474.939 kb on + strand at 474.945 kb on + strand at 474.945 kb on + strand at 474.947 kb on - strand at 474.953 kb on - strand at 474.953 kb on - strand at 474.967 kb on + strand at 474.967 kb on + strand at 474.975 kb on - strand at 474.977 kb on + strand at 474.983 kb on + strand at 474.985 kb on - strand at 474.991 kb on - strand at 474.998 kb on + strand at 475.004 kb on + strand at 475.014 kb on + strand at 475.014 kb on + strand at 475.014 kb on + strand at 475.022 kb on - strand at 475.022 kb on - strand at 475.044 kb on + strand at 475.066 kb on + strand at 475.074 kb on - strand at 475.074 kb on - strand at 475.110 kb on + strand at 475.146 kb on + strand at 475.147 kb on - strand at 475.154 kb on - strand at 475.154 kb on - strand at 475.154 kb on - strand at 475.166 kb on + strand at 475.222 kb on - strand at 475.234 kb on + strand at 475.251 kb on - strand at 475.306 kb on + strand at 475.306 kb on + strand at 475.314 kb on + strand at 475.314 kb on - strand at 475.324 kb on + strand at 475.324 kb on + strand at 475.324 kb on + strand at 475.327 kb on - strand at 475.332 kb on - strand at 475.391 kb on - strand at 475.474 kb on - strand at 475.474 kb on - strand at 475.512 kb on + strand at 475.515 kb on - strand at 475.515 kb on - strand at 475.537 kb on + strand at 475.538 kb on - strand at 475.549 kb on - strand at 475.564 kb on - strand at 475.573 kb on + strand at 475.592 kb on + strand at 475.803 kb on - strand, within Dshi_0490 at 475.814 kb on - strand, within Dshi_0490 at 475.865 kb on - strand, within Dshi_0490 at 475.870 kb on - strand, within Dshi_0490 at 475.936 kb on + strand, within Dshi_0490 at 475.944 kb on - strand, within Dshi_0490 at 475.955 kb on + strand at 475.957 kb on - strand at 476.013 kb on - strand at 476.018 kb on + strand at 476.185 kb on - strand at 476.274 kb on + strand, within Dshi_0491 at 476.279 kb on + strand, within Dshi_0491 at 476.340 kb on - strand, within Dshi_0491 at 476.355 kb on - strand, within Dshi_0491 at 476.367 kb on + strand, within Dshi_0491 at 476.457 kb on - strand, within Dshi_0491 at 476.475 kb on - strand, within Dshi_0491 at 476.485 kb on - strand, within Dshi_0491 at 476.586 kb on + strand, within Dshi_0491 at 476.596 kb on + strand, within Dshi_0491 at 476.604 kb on - strand, within Dshi_0491 at 476.645 kb on + strand, within Dshi_0491 at 476.711 kb on - strand, within Dshi_0491 at 476.811 kb on - strand, within Dshi_0491 at 476.836 kb on + strand, within Dshi_0491 at 476.836 kb on + strand, within Dshi_0491 at 476.923 kb on - strand, within Dshi_0491 at 476.966 kb on - strand, within Dshi_0491
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 474,575 + +1.1 474,575 + -0.8 474,575 + -0.2 474,575 + -1.4 474,583 - -1.5 474,583 - +2.1 474,583 - +0.4 474,611 + +1.1 474,614 - +1.2 474,615 - +0.7 474,651 - -0.1 474,651 - +0.9 474,676 + -0.9 474,678 - -0.3 474,694 - +1.2 474,696 - +0.6 474,696 - -0.8 474,699 + -1.0 474,707 - +0.3 474,707 - -1.8 474,707 - +1.2 474,707 - -0.5 474,710 + -0.4 474,718 - -0.4 474,723 + -0.7 474,765 + -0.1 474,768 - -0.2 474,768 - +0.1 474,771 + -1.5 474,778 + -1.6 474,792 - +0.8 474,799 - +0.1 474,801 + -0.5 474,806 - +0.6 474,809 - -0.2 474,811 + -0.9 474,816 + +0.2 474,816 + -0.6 474,826 + -1.9 474,826 + -0.2 474,827 + +0.1 474,837 - -0.2 474,852 - +2.1 474,860 + +0.7 474,875 + +0.1 474,880 + +0.7 474,883 - +0.1 474,908 + +0.6 474,910 - +0.6 474,916 - -0.6 474,916 - +0.1 474,922 - +0.6 474,922 - +0.3 474,939 + -1.9 474,939 + +0.7 474,945 + +0.4 474,945 + +0.7 474,947 - -0.7 474,953 - +0.1 474,953 - -0.8 474,967 + +0.2 474,967 + +1.1 474,975 - -0.7 474,977 + -0.5 474,983 + -0.2 474,985 - -0.7 474,991 - +1.1 474,998 + +1.7 475,004 + -0.1 475,014 + -1.9 475,014 + -0.4 475,014 + +0.4 475,022 - -0.3 475,022 - -0.4 475,044 + +0.3 475,066 + +1.2 475,074 - -0.8 475,074 - +1.9 475,110 + +0.3 475,146 + -0.0 475,147 - -0.2 475,154 - -0.7 475,154 - -0.1 475,154 - -0.7 475,166 + -0.4 475,222 - -0.4 475,234 + +0.5 475,251 - +0.6 475,306 + +1.2 475,306 + +0.3 475,314 + -0.3 475,314 - +1.1 475,324 + +1.2 475,324 + +0.9 475,324 + +0.1 475,327 - +0.1 475,332 - -3.1 475,391 - -0.9 475,474 - +1.3 475,474 - -1.8 475,512 + +0.1 475,515 - -1.5 475,515 - -0.3 475,537 + -0.3 475,538 - -0.1 475,549 - +0.6 475,564 - +0.6 475,573 + +0.3 475,592 + +1.1 475,803 - Dshi_0490 0.54 +1.8 475,814 - Dshi_0490 0.57 +1.2 475,865 - Dshi_0490 0.69 +0.4 475,870 - Dshi_0490 0.70 +0.4 475,936 + Dshi_0490 0.86 +0.3 475,944 - Dshi_0490 0.88 +0.5 475,955 + +0.7 475,957 - +0.5 476,013 - +1.1 476,018 + -0.1 476,185 - +0.6 476,274 + Dshi_0491 0.14 -2.1 476,279 + Dshi_0491 0.14 +0.7 476,340 - Dshi_0491 0.20 +1.4 476,355 - Dshi_0491 0.22 -0.1 476,367 + Dshi_0491 0.23 -0.7 476,457 - Dshi_0491 0.32 -0.7 476,475 - Dshi_0491 0.34 -0.2 476,485 - Dshi_0491 0.35 +0.4 476,586 + Dshi_0491 0.45 -0.9 476,596 + Dshi_0491 0.46 +0.2 476,604 - Dshi_0491 0.47 +0.5 476,645 + Dshi_0491 0.51 +0.5 476,711 - Dshi_0491 0.58 -1.5 476,811 - Dshi_0491 0.68 +0.6 476,836 + Dshi_0491 0.71 +0.4 476,836 + Dshi_0491 0.71 -0.6 476,923 - Dshi_0491 0.80 +0.0 476,966 - Dshi_0491 0.84 +1.4
Or see this region's nucleotide sequence