Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0216 and Dshi_0217 overlap by 1 nucleotides Dshi_0217 and Dshi_0218 are separated by 227 nucleotides Dshi_0218 and Dshi_0219 are separated by 3 nucleotides Dshi_0219 and Dshi_0220 are separated by 84 nucleotides
Dshi_0216: Dshi_0216 - Electron transfer flavoprotein alpha subunit (RefSeq), at 214,091 to 215,017
_0216
Dshi_0217: Dshi_0217 - Electron transfer flavoprotein alpha/beta-subunit (RefSeq), at 215,017 to 215,775
_0217
Dshi_0218: Dshi_0218 - ATP--cobalamin adenosyltransferase (RefSeq), at 216,003 to 216,575
_0218
Dshi_0219: Dshi_0219 - hypothetical protein (RefSeq), at 216,579 to 216,794
_0219
Dshi_0220: Dshi_0220 - short-chain dehydrogenase/reductase SDR (RefSeq), at 216,879 to 217,712
_0220
Position (kb) 216
217 Strain fitness (log2 ratio) -2
-1
0
1 at 215.802 kb on + strand at 215.952 kb on - strand at 216.009 kb on - strand at 216.079 kb on - strand, within Dshi_0218 at 216.156 kb on - strand, within Dshi_0218 at 216.359 kb on - strand, within Dshi_0218 at 216.359 kb on - strand, within Dshi_0218 at 216.364 kb on - strand, within Dshi_0218 at 216.564 kb on + strand at 216.564 kb on + strand at 216.579 kb on - strand at 216.579 kb on - strand at 216.782 kb on - strand at 216.830 kb on + strand at 216.833 kb on - strand at 216.834 kb on + strand at 216.838 kb on - strand at 216.927 kb on - strand at 216.985 kb on - strand, within Dshi_0220 at 216.990 kb on - strand, within Dshi_0220 at 217.008 kb on - strand, within Dshi_0220 at 217.018 kb on + strand, within Dshi_0220 at 217.018 kb on + strand, within Dshi_0220 at 217.037 kb on + strand, within Dshi_0220 at 217.045 kb on - strand, within Dshi_0220 at 217.178 kb on + strand, within Dshi_0220 at 217.240 kb on - strand, within Dshi_0220 at 217.290 kb on - strand, within Dshi_0220 at 217.300 kb on - strand, within Dshi_0220 at 217.302 kb on + strand, within Dshi_0220 at 217.310 kb on - strand, within Dshi_0220 at 217.310 kb on - strand, within Dshi_0220 at 217.423 kb on + strand, within Dshi_0220 at 217.468 kb on + strand, within Dshi_0220 at 217.480 kb on + strand, within Dshi_0220 at 217.525 kb on + strand, within Dshi_0220 at 217.529 kb on + strand, within Dshi_0220
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 215,802 + +1.0 215,952 - -1.2 216,009 - +0.2 216,079 - Dshi_0218 0.13 -2.4 216,156 - Dshi_0218 0.27 -0.1 216,359 - Dshi_0218 0.62 -0.6 216,359 - Dshi_0218 0.62 +0.8 216,364 - Dshi_0218 0.63 -1.6 216,564 + +0.6 216,564 + +0.8 216,579 - -0.7 216,579 - -0.6 216,782 - -0.6 216,830 + +0.8 216,833 - +1.6 216,834 + +0.5 216,838 - +0.4 216,927 - +0.9 216,985 - Dshi_0220 0.13 +0.8 216,990 - Dshi_0220 0.13 -0.2 217,008 - Dshi_0220 0.15 -0.6 217,018 + Dshi_0220 0.17 +0.7 217,018 + Dshi_0220 0.17 +0.7 217,037 + Dshi_0220 0.19 -0.5 217,045 - Dshi_0220 0.20 +0.8 217,178 + Dshi_0220 0.36 +0.0 217,240 - Dshi_0220 0.43 -2.1 217,290 - Dshi_0220 0.49 -0.3 217,300 - Dshi_0220 0.50 -0.0 217,302 + Dshi_0220 0.51 +0.4 217,310 - Dshi_0220 0.52 +0.9 217,310 - Dshi_0220 0.52 +1.2 217,423 + Dshi_0220 0.65 -0.9 217,468 + Dshi_0220 0.71 +1.3 217,480 + Dshi_0220 0.72 -0.1 217,525 + Dshi_0220 0.77 -0.2 217,529 + Dshi_0220 0.78 -0.5
Or see this region's nucleotide sequence