Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0160 and Dshi_0161 are separated by 1 nucleotides Dshi_0161 and Dshi_0162 are separated by 15 nucleotides Dshi_0162 and Dshi_0163 are separated by 432 nucleotides
Dshi_0160: Dshi_0160 - cobalamin biosynthesis protein CobW (RefSeq), at 162,047 to 163,126
_0160
Dshi_0161: Dshi_0161 - cobalt transporter, subunit CbtA (RefSeq), at 163,128 to 163,817
_0161
Dshi_0162: Dshi_0162 - hypothetical protein (RefSeq), at 163,833 to 164,030
_0162
Dshi_0163: Dshi_0163 - chromosome segregation protein SMC (RefSeq), at 164,463 to 167,915
_0163
Position (kb) 163
164 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 162.432 kb on - strand, within Dshi_0160 at 162.552 kb on + strand, within Dshi_0160 at 162.671 kb on - strand, within Dshi_0160 at 162.705 kb on - strand, within Dshi_0160 at 162.754 kb on + strand, within Dshi_0160 at 162.782 kb on + strand, within Dshi_0160 at 162.961 kb on + strand, within Dshi_0160 at 163.126 kb on + strand at 163.134 kb on - strand at 163.144 kb on - strand at 163.166 kb on + strand at 163.394 kb on - strand, within Dshi_0161 at 163.491 kb on - strand, within Dshi_0161 at 164.204 kb on - strand at 164.233 kb on + strand at 164.244 kb on + strand at 164.244 kb on + strand at 164.282 kb on + strand at 164.299 kb on - strand at 164.299 kb on - strand at 164.419 kb on + strand at 164.434 kb on - strand at 164.483 kb on + strand at 164.580 kb on - strand at 164.742 kb on - strand at 164.762 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 162,432 - Dshi_0160 0.36 -0.8 162,552 + Dshi_0160 0.47 -1.2 162,671 - Dshi_0160 0.58 -2.1 162,705 - Dshi_0160 0.61 +0.1 162,754 + Dshi_0160 0.65 +1.6 162,782 + Dshi_0160 0.68 +1.3 162,961 + Dshi_0160 0.85 -1.0 163,126 + +0.5 163,134 - -0.4 163,144 - -0.2 163,166 + -2.6 163,394 - Dshi_0161 0.39 -0.6 163,491 - Dshi_0161 0.53 -0.4 164,204 - -0.3 164,233 + -0.0 164,244 + -0.6 164,244 + -0.1 164,282 + +0.1 164,299 - -0.6 164,299 - +0.8 164,419 + -0.6 164,434 - +0.0 164,483 + +0.5 164,580 - -2.9 164,742 - -1.6 164,762 + -1.1
Or see this region's nucleotide sequence