Experiment: m.b. Thallium(I) acetate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0109 and Dshi_0110 overlap by 1 nucleotides Dshi_0110 and Dshi_0111 are separated by 90 nucleotides Dshi_0111 and Dshi_0112 are separated by 20 nucleotides
Dshi_0109: Dshi_0109 - Auxin Efflux Carrier (RefSeq), at 108,100 to 109,035
_0109
Dshi_0110: Dshi_0110 - protein of unknown function DUF188 (RefSeq), at 109,035 to 109,487
_0110
Dshi_0111: Dshi_0111 - major facilitator superfamily MFS_1 (RefSeq), at 109,578 to 110,813
_0111
Dshi_0112: Dshi_0112 - AFG1-family ATPase (RefSeq), at 110,834 to 112,003
_0112
Position (kb)
109
110
111 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 108.592 kb on - strand, within Dshi_0109 at 108.603 kb on + strand, within Dshi_0109 at 108.628 kb on + strand, within Dshi_0109 at 108.636 kb on - strand, within Dshi_0109 at 108.636 kb on - strand, within Dshi_0109 at 108.739 kb on - strand, within Dshi_0109 at 108.777 kb on - strand, within Dshi_0109 at 108.840 kb on - strand, within Dshi_0109 at 108.925 kb on - strand, within Dshi_0109 at 108.927 kb on + strand, within Dshi_0109 at 108.979 kb on + strand at 108.980 kb on - strand at 109.075 kb on - strand at 109.122 kb on + strand, within Dshi_0110 at 109.134 kb on + strand, within Dshi_0110 at 109.186 kb on + strand, within Dshi_0110 at 109.194 kb on - strand, within Dshi_0110 at 109.244 kb on - strand, within Dshi_0110 at 109.252 kb on + strand, within Dshi_0110 at 109.285 kb on + strand, within Dshi_0110 at 109.293 kb on - strand, within Dshi_0110 at 109.293 kb on - strand, within Dshi_0110 at 109.293 kb on - strand, within Dshi_0110 at 109.552 kb on + strand at 109.560 kb on - strand at 109.628 kb on + strand at 109.668 kb on - strand at 109.763 kb on - strand, within Dshi_0111 at 109.770 kb on + strand, within Dshi_0111 at 109.802 kb on + strand, within Dshi_0111 at 109.802 kb on + strand, within Dshi_0111 at 109.862 kb on - strand, within Dshi_0111 at 109.886 kb on + strand, within Dshi_0111 at 109.912 kb on - strand, within Dshi_0111 at 109.974 kb on - strand, within Dshi_0111 at 110.010 kb on - strand, within Dshi_0111 at 110.023 kb on - strand, within Dshi_0111 at 110.117 kb on - strand, within Dshi_0111 at 110.138 kb on + strand, within Dshi_0111 at 110.149 kb on + strand, within Dshi_0111 at 110.169 kb on + strand, within Dshi_0111 at 110.189 kb on + strand, within Dshi_0111 at 110.232 kb on + strand, within Dshi_0111 at 110.239 kb on - strand, within Dshi_0111 at 110.248 kb on + strand, within Dshi_0111 at 110.334 kb on + strand, within Dshi_0111 at 110.357 kb on - strand, within Dshi_0111 at 110.462 kb on - strand, within Dshi_0111 at 110.489 kb on - strand, within Dshi_0111 at 110.516 kb on + strand, within Dshi_0111 at 110.557 kb on + strand, within Dshi_0111 at 110.697 kb on - strand at 110.713 kb on - strand at 110.773 kb on + strand at 110.798 kb on - strand at 110.896 kb on + strand at 110.943 kb on + strand at 110.943 kb on + strand at 110.982 kb on + strand, within Dshi_0112 at 111.033 kb on - strand, within Dshi_0112 at 111.120 kb on + strand, within Dshi_0112 at 111.166 kb on + strand, within Dshi_0112 at 111.395 kb on - strand, within Dshi_0112 at 111.459 kb on + strand, within Dshi_0112 at 111.525 kb on + strand, within Dshi_0112 at 111.613 kb on - strand, within Dshi_0112 at 111.614 kb on + strand, within Dshi_0112 at 111.745 kb on + strand, within Dshi_0112 at 111.750 kb on + strand, within Dshi_0112 at 111.760 kb on + strand, within Dshi_0112
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.004 mg/ml remove 108,592 - Dshi_0109 0.53 +0.0 108,603 + Dshi_0109 0.54 +0.2 108,628 + Dshi_0109 0.56 +0.8 108,636 - Dshi_0109 0.57 -0.1 108,636 - Dshi_0109 0.57 -1.0 108,739 - Dshi_0109 0.68 +0.2 108,777 - Dshi_0109 0.72 +0.5 108,840 - Dshi_0109 0.79 +0.4 108,925 - Dshi_0109 0.88 -0.2 108,927 + Dshi_0109 0.88 -0.2 108,979 + +0.1 108,980 - +0.4 109,075 - -0.6 109,122 + Dshi_0110 0.19 +1.2 109,134 + Dshi_0110 0.22 +0.3 109,186 + Dshi_0110 0.33 -0.6 109,194 - Dshi_0110 0.35 -0.5 109,244 - Dshi_0110 0.46 +0.1 109,252 + Dshi_0110 0.48 -0.9 109,285 + Dshi_0110 0.55 -1.6 109,293 - Dshi_0110 0.57 +0.2 109,293 - Dshi_0110 0.57 -0.0 109,293 - Dshi_0110 0.57 -0.2 109,552 + -0.6 109,560 - -0.3 109,628 + -1.2 109,668 - +1.4 109,763 - Dshi_0111 0.15 -0.1 109,770 + Dshi_0111 0.16 +1.4 109,802 + Dshi_0111 0.18 +1.3 109,802 + Dshi_0111 0.18 -0.6 109,862 - Dshi_0111 0.23 -0.4 109,886 + Dshi_0111 0.25 +0.5 109,912 - Dshi_0111 0.27 -0.9 109,974 - Dshi_0111 0.32 -0.4 110,010 - Dshi_0111 0.35 -0.1 110,023 - Dshi_0111 0.36 +0.4 110,117 - Dshi_0111 0.44 +0.3 110,138 + Dshi_0111 0.45 +0.6 110,149 + Dshi_0111 0.46 +2.0 110,169 + Dshi_0111 0.48 +1.0 110,189 + Dshi_0111 0.49 +0.1 110,232 + Dshi_0111 0.53 +0.8 110,239 - Dshi_0111 0.53 +0.9 110,248 + Dshi_0111 0.54 -1.0 110,334 + Dshi_0111 0.61 +0.7 110,357 - Dshi_0111 0.63 -1.1 110,462 - Dshi_0111 0.72 -1.8 110,489 - Dshi_0111 0.74 +0.2 110,516 + Dshi_0111 0.76 +1.7 110,557 + Dshi_0111 0.79 +1.4 110,697 - +0.7 110,713 - +0.2 110,773 + -1.2 110,798 - +0.0 110,896 + -0.4 110,943 + -1.3 110,943 + -0.9 110,982 + Dshi_0112 0.13 -0.1 111,033 - Dshi_0112 0.17 +0.0 111,120 + Dshi_0112 0.24 -0.7 111,166 + Dshi_0112 0.28 -3.1 111,395 - Dshi_0112 0.48 -0.7 111,459 + Dshi_0112 0.53 +0.8 111,525 + Dshi_0112 0.59 -0.9 111,613 - Dshi_0112 0.67 +0.0 111,614 + Dshi_0112 0.67 +1.0 111,745 + Dshi_0112 0.78 -0.5 111,750 + Dshi_0112 0.78 -1.4 111,760 + Dshi_0112 0.79 +0.2
Or see this region's nucleotide sequence