Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS11090

Experiment: a-Cyclodextrin 20 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin 20 mM
2,457,084	+		LRK54_RS11085	0.32	-0.4
2,457,084	+		LRK54_RS11085	0.32	+0.1
2,457,084	+		LRK54_RS11085	0.32	-1.1
2,457,084	+		LRK54_RS11085	0.32	-1.2
2,457,084	+		LRK54_RS11085	0.32	-1.7
2,457,084	+		LRK54_RS11085	0.32	+0.3
2,457,084	+		LRK54_RS11085	0.32	-1.7
2,457,084	+		LRK54_RS11085	0.32	-1.7
2,457,084	+		LRK54_RS11085	0.32	-0.6
2,457,084	+		LRK54_RS11085	0.32	-1.2
2,457,084	+		LRK54_RS11085	0.32	-0.8
2,457,084	+		LRK54_RS11085	0.32	-0.9
2,457,084	+		LRK54_RS11085	0.32	-2.4
2,457,084	+		LRK54_RS11085	0.32	-1.7
2,457,084	+		LRK54_RS11085	0.32	-0.0
2,457,084	+		LRK54_RS11085	0.32	+0.8
2,457,084	+		LRK54_RS11085	0.32	-0.2
2,457,084	+		LRK54_RS11085	0.32	+1.6
2,457,085	-		LRK54_RS11085	0.32	+0.6
2,457,085	-		LRK54_RS11085	0.32	+1.6
2,457,085	-		LRK54_RS11085	0.32	-1.5
2,457,085	-		LRK54_RS11085	0.32	+1.6
2,457,085	-		LRK54_RS11085	0.32	-1.1
2,457,085	-		LRK54_RS11085	0.32	-1.7
2,457,085	-		LRK54_RS11085	0.32	-1.3
2,457,085	-		LRK54_RS11085	0.32	-1.2
2,457,085	-		LRK54_RS11085	0.32	+0.4
2,457,085	-		LRK54_RS11085	0.32	-0.0
2,457,085	-		LRK54_RS11085	0.32	+1.8
2,457,085	-		LRK54_RS11085	0.32	-2.0
2,457,085	-		LRK54_RS11085	0.32	-0.3
2,457,085	-		LRK54_RS11085	0.32	-0.5
2,457,085	-		LRK54_RS11085	0.32	+0.6
2,457,085	-		LRK54_RS11085	0.32	-1.2
2,457,085	-		LRK54_RS11085	0.32	+0.3
2,457,138	+		LRK54_RS11085	0.36	-0.7
2,457,138	+		LRK54_RS11085	0.36	-1.7
2,457,138	+		LRK54_RS11085	0.36	-0.9
2,457,138	+		LRK54_RS11085	0.36	+0.1
2,457,138	+		LRK54_RS11085	0.36	-0.9
2,457,138	+		LRK54_RS11085	0.36	-0.2
2,457,138	+		LRK54_RS11085	0.36	+0.1
2,457,138	+		LRK54_RS11085	0.36	-1.1
2,457,138	+		LRK54_RS11085	0.36	-0.4
2,457,138	+		LRK54_RS11085	0.36	-2.2
2,457,138	+		LRK54_RS11085	0.36	-0.6
2,457,138	+		LRK54_RS11085	0.36	-1.6
2,457,138	+		LRK54_RS11085	0.36	-1.5
2,457,138	+		LRK54_RS11085	0.36	-1.0
2,457,138	+		LRK54_RS11085	0.36	-0.4
2,457,138	+		LRK54_RS11085	0.36	-1.2
2,457,138	+		LRK54_RS11085	0.36	-2.3
2,457,138	+		LRK54_RS11085	0.36	+0.6
2,457,138	+		LRK54_RS11085	0.36	-0.6
2,457,138	+		LRK54_RS11085	0.36	-1.8
2,457,138	+		LRK54_RS11085	0.36	-0.0
2,457,138	+		LRK54_RS11085	0.36	-1.1
2,457,138	+		LRK54_RS11085	0.36	-1.3
2,457,138	+		LRK54_RS11085	0.36	+0.3
2,457,138	+		LRK54_RS11085	0.36	-2.1
2,457,138	+		LRK54_RS11085	0.36	-2.7
2,457,139	-		LRK54_RS11085	0.36	+3.6
2,457,139	-		LRK54_RS11085	0.36	-0.8
2,457,139	-		LRK54_RS11085	0.36	-2.4
2,457,139	-		LRK54_RS11085	0.36	-0.1
2,457,139	-		LRK54_RS11085	0.36	-1.2
2,457,139	-		LRK54_RS11085	0.36	-0.6
2,457,139	-		LRK54_RS11085	0.36	+0.4
2,457,139	-		LRK54_RS11085	0.36	-0.9
2,457,139	-		LRK54_RS11085	0.36	+1.2
2,457,139	-		LRK54_RS11085	0.36	-0.2
2,457,139	-		LRK54_RS11085	0.36	-0.8
2,457,139	-		LRK54_RS11085	0.36	-1.8
2,457,139	-		LRK54_RS11085	0.36	-0.3
2,457,139	-		LRK54_RS11085	0.36	-0.6
2,457,139	-		LRK54_RS11085	0.36	-0.0
2,457,139	-		LRK54_RS11085	0.36	-1.0
2,457,139	-		LRK54_RS11085	0.36	-0.0
2,457,139	-		LRK54_RS11085	0.36	-2.4
2,457,139	-		LRK54_RS11085	0.36	-0.6
2,457,139	-		LRK54_RS11085	0.36	-2.1
2,457,139	-		LRK54_RS11085	0.36	-0.1
2,457,139	-		LRK54_RS11085	0.36	-1.6
2,457,139	-		LRK54_RS11085	0.36	+1.6
2,457,139	-		LRK54_RS11085	0.36	-2.1
2,457,139	-		LRK54_RS11085	0.36	+0.3
2,457,139	-		LRK54_RS11085	0.36	+0.6
2,457,139	-		LRK54_RS11085	0.36	+0.7
2,457,139	-		LRK54_RS11085	0.36	-0.2
2,457,139	-		LRK54_RS11085	0.36	+1.8
2,457,139	-		LRK54_RS11085	0.36	+0.7
2,457,139	-		LRK54_RS11085	0.36	-0.7
2,457,139	-		LRK54_RS11085	0.36	+0.8
2,457,139	-		LRK54_RS11085	0.36	-0.9
2,457,180	+		LRK54_RS11085	0.39	-2.0
2,457,180	+		LRK54_RS11085	0.39	-0.0
2,457,180	+		LRK54_RS11085	0.39	+0.4
2,457,180	+		LRK54_RS11085	0.39	-1.2
2,457,180	+		LRK54_RS11085	0.39	+1.6
2,457,180	+		LRK54_RS11085	0.39	+0.6
2,457,180	+		LRK54_RS11085	0.39	-2.3
2,457,180	+		LRK54_RS11085	0.39	+0.3
2,457,180	+		LRK54_RS11085	0.39	+1.6
2,457,181	-		LRK54_RS11085	0.39	+0.6
2,457,181	-		LRK54_RS11085	0.39	+0.6
2,457,181	-		LRK54_RS11085	0.39	+1.4
2,457,181	-		LRK54_RS11085	0.39	+0.7
2,457,181	-		LRK54_RS11085	0.39	-1.4
2,457,181	-		LRK54_RS11085	0.39	-1.0
2,457,181	-		LRK54_RS11085	0.39	-1.9
2,457,181	-		LRK54_RS11085	0.39	-0.4
2,457,285	+		LRK54_RS11085	0.47	-0.6
2,457,285	+		LRK54_RS11085	0.47	-1.2
2,457,285	+		LRK54_RS11085	0.47	-1.9
2,457,285	+		LRK54_RS11085	0.47	-0.7
2,457,285	+		LRK54_RS11085	0.47	-1.1
2,457,285	+		LRK54_RS11085	0.47	-0.0
2,457,285	+		LRK54_RS11085	0.47	-0.4
2,457,285	+		LRK54_RS11085	0.47	+1.3
2,457,285	+		LRK54_RS11085	0.47	+0.1
2,457,285	+		LRK54_RS11085	0.47	+0.1
2,457,285	+		LRK54_RS11085	0.47	-3.5
2,457,285	+		LRK54_RS11085	0.47	-0.1
2,457,285	+		LRK54_RS11085	0.47	-0.5
2,457,285	+		LRK54_RS11085	0.47	+0.8
2,457,285	+		LRK54_RS11085	0.47	-1.0
2,457,285	+		LRK54_RS11085	0.47	-2.2
2,457,285	+		LRK54_RS11085	0.47	+0.6
2,457,285	+		LRK54_RS11085	0.47	+0.6
2,457,285	+		LRK54_RS11085	0.47	-0.6
2,457,285	+		LRK54_RS11085	0.47	-0.7
2,457,285	+		LRK54_RS11085	0.47	+1.3
2,457,285	+		LRK54_RS11085	0.47	+3.6
2,457,285	+		LRK54_RS11085	0.47	+1.9
2,457,285	+		LRK54_RS11085	0.47	-1.1
2,457,285	+		LRK54_RS11085	0.47	-0.0
2,457,285	+		LRK54_RS11085	0.47	-0.9
2,457,285	+		LRK54_RS11085	0.47	-1.9
2,457,285	+		LRK54_RS11085	0.47	-0.4
2,457,285	+		LRK54_RS11085	0.47	-0.0
2,457,285	+		LRK54_RS11085	0.47	-1.1
2,457,286	-		LRK54_RS11085	0.47	-0.0
2,457,286	-		LRK54_RS11085	0.47	-2.5
2,457,286	-		LRK54_RS11085	0.47	+0.6
2,457,286	-		LRK54_RS11085	0.47	+0.6
2,457,286	-		LRK54_RS11085	0.47	+1.0
2,457,286	-		LRK54_RS11085	0.47	-0.1
2,457,286	-		LRK54_RS11085	0.47	+0.1
2,457,286	-		LRK54_RS11085	0.47	+0.4
2,457,286	-		LRK54_RS11085	0.47	+0.8
2,457,286	-		LRK54_RS11085	0.47	-1.3
2,457,286	-		LRK54_RS11085	0.47	+0.4
2,457,286	-		LRK54_RS11085	0.47	-0.6
2,457,286	-		LRK54_RS11085	0.47	-1.2
2,457,286	-		LRK54_RS11085	0.47	-0.1
2,457,286	-		LRK54_RS11085	0.47	-1.0
2,457,286	-		LRK54_RS11085	0.47	+1.1
2,457,286	-		LRK54_RS11085	0.47	-0.4
2,457,286	-		LRK54_RS11085	0.47	+0.5
2,457,286	-		LRK54_RS11085	0.47	-2.1
2,457,286	-		LRK54_RS11085	0.47	+1.6
2,457,286	-		LRK54_RS11085	0.47	-1.8
2,457,286	-		LRK54_RS11085	0.47	+1.0
2,457,286	-		LRK54_RS11085	0.47	-0.7
2,457,286	-		LRK54_RS11085	0.47	-2.1
2,457,286	-		LRK54_RS11085	0.47	+0.3
2,457,286	-		LRK54_RS11085	0.47	+0.6
2,457,286	-		LRK54_RS11085	0.47	-1.2
2,457,286	-		LRK54_RS11085	0.47	+2.0
2,457,286	-		LRK54_RS11085	0.47	-0.4
2,457,286	-		LRK54_RS11085	0.47	-0.2
2,457,306	+		LRK54_RS11085	0.48	-0.9
2,457,374	+		LRK54_RS11085	0.53	+0.8
2,457,374	+		LRK54_RS11085	0.53	-0.9
2,457,374	+		LRK54_RS11085	0.53	-1.8
2,457,374	+		LRK54_RS11085	0.53	+0.1
2,457,374	+		LRK54_RS11085	0.53	+0.1
2,457,374	+		LRK54_RS11085	0.53	+0.6
2,457,375	-		LRK54_RS11085	0.53	-1.9
2,457,375	-		LRK54_RS11085	0.53	-1.2
2,457,375	-		LRK54_RS11085	0.53	-0.1
2,457,591	+		LRK54_RS11085	0.69	-1.2
2,457,591	+		LRK54_RS11085	0.69	-1.0
2,457,591	+		LRK54_RS11085	0.69	-0.6
2,457,591	+		LRK54_RS11085	0.69	+0.2
2,457,592	-		LRK54_RS11085	0.69	+0.3
2,457,592	-		LRK54_RS11085	0.69	-1.7
2,457,592	-		LRK54_RS11085	0.69	-2.1
2,457,592	-		LRK54_RS11085	0.69	-0.2
2,457,684	+		LRK54_RS11085	0.76	+0.8
2,457,684	+		LRK54_RS11085	0.76	-1.7
2,457,684	+		LRK54_RS11085	0.76	-0.9
2,457,684	+		LRK54_RS11085	0.76	-1.6
2,457,684	+		LRK54_RS11085	0.76	-0.4
2,457,684	+		LRK54_RS11085	0.76	-0.6
2,457,684	+		LRK54_RS11085	0.76	-1.2
2,457,684	+		LRK54_RS11085	0.76	+1.2
2,457,684	+		LRK54_RS11085	0.76	-2.1
2,457,684	+		LRK54_RS11085	0.76	+0.1
2,457,684	+		LRK54_RS11085	0.76	-2.2
2,457,684	+		LRK54_RS11085	0.76	-0.4
2,457,684	+		LRK54_RS11085	0.76	-0.6
2,457,684	+		LRK54_RS11085	0.76	-1.5
2,457,684	+		LRK54_RS11085	0.76	-0.2
2,457,684	+		LRK54_RS11085	0.76	-2.2
2,457,685	-		LRK54_RS11085	0.76	+1.6
2,457,685	-		LRK54_RS11085	0.76	-0.4
2,457,685	-		LRK54_RS11085	0.76	-1.0
2,457,685	-		LRK54_RS11085	0.76	+0.6
2,457,685	-		LRK54_RS11085	0.76	-2.2
2,457,685	-		LRK54_RS11085	0.76	-1.3
2,457,685	-		LRK54_RS11085	0.76	-0.9
2,457,685	-		LRK54_RS11085	0.76	-2.5
2,457,685	-		LRK54_RS11085	0.76	+0.7
2,457,685	-		LRK54_RS11085	0.76	-1.0
2,457,685	-		LRK54_RS11085	0.76	-0.4
2,457,685	-		LRK54_RS11085	0.76	-1.3
2,457,685	-		LRK54_RS11085	0.76	-0.4
2,457,824	+		LRK54_RS11085	0.86	-0.0
2,457,825	-		LRK54_RS11085	0.86	+1.3
2,457,825	-		LRK54_RS11085	0.86	-1.2
2,457,837	+		LRK54_RS11085	0.87	+0.9
2,458,028	+				-1.5
2,458,028	+				-2.1
2,458,028	+				-1.7
2,458,029	-				-1.6
2,458,029	-				+0.6
2,458,029	-				-1.2
2,458,294	+		LRK54_RS11090	0.12	-1.4
2,458,294	+		LRK54_RS11090	0.12	-0.0
2,458,294	+		LRK54_RS11090	0.12	+0.4
2,458,294	+		LRK54_RS11090	0.12	+4.0
2,458,294	+		LRK54_RS11090	0.12	+1.4
2,458,294	+		LRK54_RS11090	0.12	+1.5
2,458,294	+		LRK54_RS11090	0.12	-0.8
2,458,294	+		LRK54_RS11090	0.12	+1.4
2,458,294	+		LRK54_RS11090	0.12	+1.6
2,458,294	+		LRK54_RS11090	0.12	+1.8
2,458,294	+		LRK54_RS11090	0.12	-1.0
2,458,294	+		LRK54_RS11090	0.12	+1.0
2,458,294	+		LRK54_RS11090	0.12	-0.4
2,458,294	+		LRK54_RS11090	0.12	+1.5
2,458,294	+		LRK54_RS11090	0.12	+0.8
2,458,294	+		LRK54_RS11090	0.12	+0.4
2,458,294	+		LRK54_RS11090	0.12	+0.1
2,458,295	-		LRK54_RS11090	0.12	-0.4
2,458,295	-		LRK54_RS11090	0.12	+1.1
2,458,295	-		LRK54_RS11090	0.12	+0.4
2,458,295	-		LRK54_RS11090	0.12	+1.0
2,458,295	-		LRK54_RS11090	0.12	+0.3
2,458,295	-		LRK54_RS11090	0.12	+0.6
2,458,295	-		LRK54_RS11090	0.12	-0.6
2,458,295	-		LRK54_RS11090	0.12	-0.0
2,458,295	-		LRK54_RS11090	0.12	+1.3
2,458,295	-		LRK54_RS11090	0.12	+1.1
2,458,295	-		LRK54_RS11090	0.12	-0.0
2,458,295	-		LRK54_RS11090	0.12	-0.9
2,458,295	-		LRK54_RS11090	0.12	+0.6
2,458,295	-		LRK54_RS11090	0.12	+0.1
2,458,295	-		LRK54_RS11090	0.12	+0.6
2,458,549	+		LRK54_RS11090	0.26	+4.4
2,458,549	+		LRK54_RS11090	0.26	+3.3
2,458,549	+		LRK54_RS11090	0.26	-1.1
2,458,549	+		LRK54_RS11090	0.26	-1.3
2,458,549	+		LRK54_RS11090	0.26	-0.7
2,458,549	+		LRK54_RS11090	0.26	+1.0
2,458,549	+		LRK54_RS11090	0.26	+0.1
2,458,549	+		LRK54_RS11090	0.26	+2.0
2,458,549	+		LRK54_RS11090	0.26	+0.3
2,458,549	+		LRK54_RS11090	0.26	+1.0
2,458,549	+		LRK54_RS11090	0.26	+0.0
2,458,549	+		LRK54_RS11090	0.26	+1.6
2,458,549	+		LRK54_RS11090	0.26	+1.2
2,458,549	+		LRK54_RS11090	0.26	-0.7
2,458,549	+		LRK54_RS11090	0.26	+0.6
2,458,549	+		LRK54_RS11090	0.26	+1.1
2,458,549	+		LRK54_RS11090	0.26	+2.7
2,458,550	-		LRK54_RS11090	0.26	-0.3
2,458,550	-		LRK54_RS11090	0.26	+1.4
2,458,550	-		LRK54_RS11090	0.26	+0.8
2,458,550	-		LRK54_RS11090	0.26	+0.5
2,458,550	-		LRK54_RS11090	0.26	+0.1
2,458,550	-		LRK54_RS11090	0.26	+0.5
2,458,550	-		LRK54_RS11090	0.26	+0.5
2,458,550	-		LRK54_RS11090	0.26	+0.5
2,458,550	-		LRK54_RS11090	0.26	+0.7
2,458,550	-		LRK54_RS11090	0.26	-0.4
2,458,550	-		LRK54_RS11090	0.26	+0.8
2,458,550	-		LRK54_RS11090	0.26	-0.6
2,458,550	-		LRK54_RS11090	0.26	+0.3
2,458,550	-		LRK54_RS11090	0.26	-1.0
2,458,550	-		LRK54_RS11090	0.26	-1.7
2,458,552	+		LRK54_RS11090	0.26	+1.7
2,458,552	+		LRK54_RS11090	0.26	-0.5
2,458,552	+		LRK54_RS11090	0.26	-0.3
2,458,552	+		LRK54_RS11090	0.26	+1.0
2,458,552	+		LRK54_RS11090	0.26	+0.2
2,458,552	+		LRK54_RS11090	0.26	+0.6
2,458,552	+		LRK54_RS11090	0.26	+1.6
2,458,552	+		LRK54_RS11090	0.26	-1.9
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2,458,552	+		LRK54_RS11090	0.26	+1.1
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2,458,552	+		LRK54_RS11090	0.26	+0.1
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2,458,552	+		LRK54_RS11090	0.26	+1.1
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2,458,553	-		LRK54_RS11090	0.26	+3.1
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2,458,636	+		LRK54_RS11090	0.31	-1.1
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2,458,759	+		LRK54_RS11090	0.37	+1.1
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2,458,760	-		LRK54_RS11090	0.37	+0.1
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2,458,786	+		LRK54_RS11090	0.39	+2.1
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2,458,787	-		LRK54_RS11090	0.39	+3.1
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2,459,221	+		LRK54_RS11090	0.62	+1.1
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2,459,221	+		LRK54_RS11090	0.62	-1.3
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