Experiment: Uridine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_11570 and AO356_11575 are separated by 329 nucleotides AO356_11575 and AO356_11580 overlap by 4 nucleotides AO356_11580 and AO356_11585 are separated by 134 nucleotides
AO356_11570: AO356_11570 - hypothetical protein, at 2,620,423 to 2,621,148
_11570
AO356_11575: AO356_11575 - transposase, at 2,621,478 to 2,621,783
_11575
AO356_11580: AO356_11580 - transposase, at 2,621,780 to 2,622,616
_11580
AO356_11585: AO356_11585 - lipid A biosynthesis lauroyl acyltransferase, at 2,622,751 to 2,623,638
_11585
Position (kb)
2621
2622 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2620.622 kb on + strand, within AO356_11570 at 2620.635 kb on - strand, within AO356_11570 at 2620.821 kb on - strand, within AO356_11570 at 2620.821 kb on - strand, within AO356_11570 at 2620.821 kb on - strand, within AO356_11570 at 2620.922 kb on + strand, within AO356_11570 at 2620.922 kb on + strand, within AO356_11570 at 2620.923 kb on - strand, within AO356_11570 at 2620.966 kb on - strand, within AO356_11570 at 2620.966 kb on - strand, within AO356_11570 at 2621.015 kb on + strand, within AO356_11570 at 2621.015 kb on + strand, within AO356_11570 at 2621.015 kb on + strand, within AO356_11570 at 2621.015 kb on + strand, within AO356_11570 at 2621.015 kb on + strand, within AO356_11570 at 2621.015 kb on + strand, within AO356_11570 at 2621.015 kb on + strand, within AO356_11570 at 2621.016 kb on - strand, within AO356_11570 at 2621.016 kb on - strand, within AO356_11570 at 2621.016 kb on - strand, within AO356_11570 at 2621.016 kb on - strand, within AO356_11570 at 2621.016 kb on - strand, within AO356_11570 at 2621.016 kb on - strand, within AO356_11570 at 2621.016 kb on - strand, within AO356_11570 at 2621.016 kb on - strand, within AO356_11570 at 2621.016 kb on - strand, within AO356_11570 at 2621.016 kb on - strand, within AO356_11570 at 2621.016 kb on - strand, within AO356_11570 at 2621.016 kb on - strand, within AO356_11570 at 2621.016 kb on - strand, within AO356_11570 at 2621.050 kb on + strand, within AO356_11570 at 2621.050 kb on + strand, within AO356_11570 at 2621.050 kb on + strand, within AO356_11570 at 2621.051 kb on - strand, within AO356_11570 at 2621.051 kb on - strand, within AO356_11570 at 2621.121 kb on + strand at 2621.121 kb on + strand at 2621.121 kb on + strand at 2621.121 kb on + strand at 2621.121 kb on + strand at 2621.122 kb on - strand at 2621.122 kb on - strand at 2621.172 kb on + strand at 2621.172 kb on + strand at 2621.172 kb on + strand at 2621.173 kb on - strand at 2621.173 kb on - strand at 2621.173 kb on - strand at 2621.173 kb on - strand at 2621.173 kb on - strand at 2621.173 kb on - strand at 2621.173 kb on - strand at 2621.173 kb on - strand at 2621.173 kb on - strand at 2621.206 kb on + strand at 2621.206 kb on + strand at 2621.206 kb on + strand at 2621.206 kb on + strand at 2621.206 kb on + strand at 2621.207 kb on - strand at 2621.207 kb on - strand at 2621.238 kb on + strand at 2621.238 kb on + strand at 2621.238 kb on + strand at 2621.238 kb on + strand at 2621.238 kb on + strand at 2621.238 kb on + strand at 2621.238 kb on + strand at 2621.238 kb on + strand at 2621.238 kb on + strand at 2621.238 kb on + strand at 2621.238 kb on + strand at 2621.239 kb on - strand at 2621.239 kb on - strand at 2621.239 kb on - strand at 2621.239 kb on - strand at 2621.239 kb on - strand at 2621.239 kb on - strand at 2621.239 kb on - strand at 2621.239 kb on - strand at 2621.239 kb on - strand at 2621.239 kb on - strand at 2621.239 kb on - strand at 2621.242 kb on + strand at 2621.242 kb on + strand at 2621.242 kb on + strand at 2621.242 kb on + strand at 2621.242 kb on + strand at 2621.242 kb on + strand at 2621.242 kb on + strand at 2621.242 kb on + strand at 2621.242 kb on + strand at 2621.242 kb on + strand at 2621.242 kb on + strand at 2621.242 kb on + strand at 2621.242 kb on + strand at 2621.242 kb on + strand at 2621.242 kb on + strand at 2621.243 kb on - strand at 2621.243 kb on - strand at 2621.243 kb on - strand at 2621.243 kb on - strand at 2621.243 kb on - strand at 2621.243 kb on - strand at 2621.243 kb on - strand at 2621.243 kb on - strand at 2621.243 kb on - strand at 2621.295 kb on + strand at 2621.295 kb on + strand at 2621.295 kb on + strand at 2621.295 kb on + strand at 2621.295 kb on + strand at 2621.295 kb on + strand at 2621.295 kb on + strand at 2621.295 kb on + strand at 2621.295 kb on + strand at 2621.295 kb on + strand at 2621.295 kb on + strand at 2621.295 kb on + strand at 2621.295 kb on + strand at 2621.295 kb on + strand at 2621.295 kb on + strand at 2621.295 kb on + strand at 2621.296 kb on - strand at 2621.296 kb on - strand at 2621.296 kb on - strand at 2621.296 kb on - strand at 2621.296 kb on - strand at 2621.315 kb on + strand at 2621.315 kb on + strand at 2621.315 kb on + strand at 2621.315 kb on + strand at 2621.316 kb on - strand at 2621.316 kb on - strand at 2621.316 kb on - strand at 2621.316 kb on - strand at 2621.424 kb on - strand at 2621.424 kb on - strand at 2621.424 kb on - strand at 2621.424 kb on - strand at 2621.424 kb on - strand at 2621.424 kb on - strand at 2621.427 kb on - strand at 2621.444 kb on - strand at 2622.640 kb on + strand at 2622.640 kb on + strand at 2622.640 kb on + strand at 2622.640 kb on + strand at 2622.669 kb on + strand at 2622.669 kb on + strand at 2622.669 kb on + strand at 2622.669 kb on + strand at 2622.669 kb on + strand at 2622.669 kb on + strand at 2622.669 kb on + strand at 2622.669 kb on + strand at 2622.669 kb on + strand at 2622.669 kb on + strand at 2622.669 kb on + strand at 2622.669 kb on + strand at 2622.669 kb on + strand at 2622.669 kb on + strand at 2622.669 kb on + strand at 2622.669 kb on + strand at 2622.669 kb on + strand at 2622.669 kb on + strand at 2622.669 kb on + strand at 2622.669 kb on + strand at 2622.669 kb on + strand at 2622.669 kb on + strand at 2622.669 kb on + strand at 2622.669 kb on + strand at 2622.669 kb on + strand at 2622.669 kb on + strand at 2622.670 kb on - strand at 2622.670 kb on - strand at 2622.670 kb on - strand at 2622.670 kb on - strand at 2622.670 kb on - strand at 2622.670 kb on - strand at 2622.670 kb on - strand at 2622.670 kb on - strand at 2622.670 kb on - strand at 2622.670 kb on - strand at 2622.670 kb on - strand at 2622.670 kb on - strand at 2622.670 kb on - strand at 2622.670 kb on - strand at 2622.670 kb on - strand at 2622.670 kb on - strand at 2622.670 kb on - strand at 2622.670 kb on - strand at 2622.670 kb on - strand at 2622.670 kb on - strand at 2622.670 kb on - strand at 2622.670 kb on - strand at 2622.670 kb on - strand at 2622.670 kb on - strand at 2622.670 kb on - strand at 2622.670 kb on - strand at 2622.670 kb on - strand at 2622.670 kb on - strand at 2622.670 kb on - strand at 2622.670 kb on - strand at 2622.670 kb on - strand at 2622.670 kb on - strand at 2622.670 kb on - strand at 2622.670 kb on - strand at 2622.670 kb on - strand at 2622.673 kb on + strand at 2622.673 kb on + strand at 2622.673 kb on + strand at 2622.673 kb on + strand at 2622.673 kb on + strand at 2622.673 kb on + strand at 2622.674 kb on - strand at 2622.674 kb on - strand at 2622.674 kb on - strand at 2622.674 kb on - strand at 2622.674 kb on - strand at 2622.674 kb on - strand at 2622.674 kb on - strand at 2622.674 kb on - strand at 2622.683 kb on + strand at 2622.683 kb on + strand at 2622.683 kb on + strand at 2622.683 kb on + strand at 2622.684 kb on - strand at 2622.684 kb on - strand at 2622.684 kb on - strand at 2622.684 kb on - strand at 2622.684 kb on - strand at 2622.684 kb on - strand at 2622.734 kb on + strand at 2622.734 kb on + strand at 2622.734 kb on + strand at 2622.734 kb on + strand at 2622.734 kb on + strand at 2622.735 kb on - strand at 2622.735 kb on - strand at 2622.755 kb on + strand at 2622.756 kb on - strand at 2622.756 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Uridine (C) remove 2,620,622 + AO356_11570 0.27 +0.3 2,620,635 - AO356_11570 0.29 -0.3 2,620,821 - AO356_11570 0.55 -2.1 2,620,821 - AO356_11570 0.55 -0.2 2,620,821 - AO356_11570 0.55 -0.3 2,620,922 + AO356_11570 0.69 -0.0 2,620,922 + AO356_11570 0.69 -0.2 2,620,923 - AO356_11570 0.69 -0.0 2,620,966 - AO356_11570 0.75 -0.4 2,620,966 - AO356_11570 0.75 -0.3 2,621,015 + AO356_11570 0.82 +0.7 2,621,015 + AO356_11570 0.82 +0.3 2,621,015 + AO356_11570 0.82 -0.2 2,621,015 + AO356_11570 0.82 -0.7 2,621,015 + AO356_11570 0.82 +0.3 2,621,015 + AO356_11570 0.82 +0.5 2,621,015 + AO356_11570 0.82 -0.1 2,621,016 - AO356_11570 0.82 +0.1 2,621,016 - AO356_11570 0.82 -0.7 2,621,016 - AO356_11570 0.82 +1.4 2,621,016 - AO356_11570 0.82 -0.0 2,621,016 - AO356_11570 0.82 -0.2 2,621,016 - AO356_11570 0.82 -1.1 2,621,016 - AO356_11570 0.82 +0.4 2,621,016 - AO356_11570 0.82 -0.0 2,621,016 - AO356_11570 0.82 +0.0 2,621,016 - AO356_11570 0.82 -0.3 2,621,016 - AO356_11570 0.82 -1.0 2,621,016 - AO356_11570 0.82 +1.1 2,621,016 - AO356_11570 0.82 -0.3 2,621,050 + AO356_11570 0.86 -0.4 2,621,050 + AO356_11570 0.86 -0.3 2,621,050 + AO356_11570 0.86 -0.9 2,621,051 - AO356_11570 0.87 -0.1 2,621,051 - AO356_11570 0.87 +0.8 2,621,121 + -0.3 2,621,121 + +0.4 2,621,121 + -0.2 2,621,121 + -0.7 2,621,121 + +0.2 2,621,122 - -0.2 2,621,122 - +0.2 2,621,172 + -0.0 2,621,172 + +0.4 2,621,172 + +0.2 2,621,173 - -1.5 2,621,173 - -0.7 2,621,173 - -0.3 2,621,173 - +0.6 2,621,173 - +0.1 2,621,173 - +0.2 2,621,173 - -0.0 2,621,173 - -0.9 2,621,173 - -0.3 2,621,206 + +0.2 2,621,206 + -0.5 2,621,206 + +0.5 2,621,206 + +0.9 2,621,206 + -0.6 2,621,207 - -0.8 2,621,207 - -0.0 2,621,238 + +0.4 2,621,238 + -0.3 2,621,238 + -0.4 2,621,238 + +1.1 2,621,238 + +0.1 2,621,238 + +0.7 2,621,238 + -1.1 2,621,238 + -0.5 2,621,238 + +1.6 2,621,238 + -0.5 2,621,238 + +0.4 2,621,239 - +0.1 2,621,239 - -0.2 2,621,239 - -0.2 2,621,239 - -1.1 2,621,239 - +0.3 2,621,239 - +0.7 2,621,239 - +0.6 2,621,239 - -0.2 2,621,239 - +0.2 2,621,239 - -0.4 2,621,239 - -1.7 2,621,242 + -0.1 2,621,242 + +0.1 2,621,242 + -0.8 2,621,242 + +0.3 2,621,242 + +0.4 2,621,242 + -0.0 2,621,242 + +0.9 2,621,242 + +0.6 2,621,242 + -0.8 2,621,242 + -0.0 2,621,242 + +0.9 2,621,242 + +0.7 2,621,242 + -0.2 2,621,242 + -1.1 2,621,242 + +0.5 2,621,243 - -1.1 2,621,243 - -0.3 2,621,243 - -0.2 2,621,243 - -0.3 2,621,243 - -0.5 2,621,243 - +0.7 2,621,243 - +0.2 2,621,243 - +0.9 2,621,243 - -0.2 2,621,295 + +0.2 2,621,295 + -0.1 2,621,295 + -0.7 2,621,295 + -0.6 2,621,295 + -0.8 2,621,295 + -0.3 2,621,295 + -1.0 2,621,295 + -0.7 2,621,295 + -0.1 2,621,295 + +0.3 2,621,295 + -0.5 2,621,295 + +0.6 2,621,295 + +0.3 2,621,295 + -1.1 2,621,295 + +0.3 2,621,295 + -0.3 2,621,296 - -0.1 2,621,296 - +0.9 2,621,296 - -0.1 2,621,296 - -0.2 2,621,296 - -0.4 2,621,315 + -0.6 2,621,315 + +0.8 2,621,315 + +0.8 2,621,315 + -0.2 2,621,316 - +0.9 2,621,316 - -0.5 2,621,316 - +0.5 2,621,316 - -1.0 2,621,424 - +0.5 2,621,424 - +0.5 2,621,424 - +0.2 2,621,424 - +0.1 2,621,424 - +1.9 2,621,424 - +0.3 2,621,427 - +0.9 2,621,444 - -0.6 2,622,640 + +0.3 2,622,640 + +0.2 2,622,640 + +0.4 2,622,640 + -0.7 2,622,669 + -1.2 2,622,669 + -1.1 2,622,669 + +1.1 2,622,669 + -0.4 2,622,669 + +0.7 2,622,669 + +0.5 2,622,669 + +0.7 2,622,669 + -0.6 2,622,669 + +0.5 2,622,669 + +0.5 2,622,669 + -0.1 2,622,669 + +0.4 2,622,669 + +1.0 2,622,669 + +0.0 2,622,669 + +0.8 2,622,669 + +0.2 2,622,669 + -0.4 2,622,669 + +0.1 2,622,669 + -0.0 2,622,669 + +0.3 2,622,669 + +0.1 2,622,669 + -0.0 2,622,669 + +0.8 2,622,669 + +0.6 2,622,669 + -0.5 2,622,669 + -0.3 2,622,670 - -0.1 2,622,670 - -0.5 2,622,670 - +0.5 2,622,670 - +0.6 2,622,670 - +0.1 2,622,670 - -0.2 2,622,670 - -0.2 2,622,670 - +0.5 2,622,670 - +0.3 2,622,670 - -0.6 2,622,670 - +0.6 2,622,670 - +0.6 2,622,670 - -0.1 2,622,670 - -0.2 2,622,670 - +0.3 2,622,670 - -0.0 2,622,670 - -0.2 2,622,670 - -0.2 2,622,670 - +0.7 2,622,670 - +0.4 2,622,670 - -0.1 2,622,670 - -0.1 2,622,670 - -0.4 2,622,670 - +2.5 2,622,670 - -0.1 2,622,670 - +0.5 2,622,670 - +0.6 2,622,670 - +0.7 2,622,670 - +0.3 2,622,670 - +0.9 2,622,670 - +0.2 2,622,670 - -0.3 2,622,670 - -1.0 2,622,670 - +0.5 2,622,670 - -1.3 2,622,673 + +0.2 2,622,673 + -0.7 2,622,673 + -0.3 2,622,673 + +0.8 2,622,673 + +0.7 2,622,673 + -0.1 2,622,674 - -0.7 2,622,674 - +0.0 2,622,674 - -0.2 2,622,674 - -0.4 2,622,674 - +0.4 2,622,674 - -0.2 2,622,674 - +1.0 2,622,674 - +1.9 2,622,683 + +0.6 2,622,683 + +1.1 2,622,683 + +0.9 2,622,683 + -0.1 2,622,684 - -0.7 2,622,684 - +0.0 2,622,684 - -0.6 2,622,684 - -0.4 2,622,684 - +0.0 2,622,684 - +0.5 2,622,734 + +0.5 2,622,734 + +0.9 2,622,734 + +1.6 2,622,734 + +1.0 2,622,734 + -0.6 2,622,735 - -0.6 2,622,735 - -0.8 2,622,755 + -0.5 2,622,756 - +0.3 2,622,756 - -1.5
Or see this region's nucleotide sequence