Experiment: m.b. sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2712 and Dshi_2713 are separated by 16 nucleotides Dshi_2713 and Dshi_2714 overlap by 4 nucleotides Dshi_2714 and Dshi_2715 are separated by 454 nucleotides
Dshi_2712: Dshi_2712 - Phosphatidylethanolamine N-methyltransferase (RefSeq), at 2,874,084 to 2,874,764
_2712
Dshi_2713: Dshi_2713 - CDP-diacylglycerol--serineO-phosphatidyltransferase (RefSeq), at 2,874,781 to 2,875,530
_2713
Dshi_2714: Dshi_2714 - phosphatidylserine decarboxylase related protein (RefSeq), at 2,875,527 to 2,876,204
_2714
Dshi_2715: Dshi_2715 - DEAD/DEAH box helicase domain protein (RefSeq), at 2,876,659 to 2,877,963
_2715
Position (kb)
2875
2876
2877 Strain fitness (log2 ratio)
-1
0
1 at 2874.534 kb on - strand, within Dshi_2712 at 2874.630 kb on + strand, within Dshi_2712 at 2874.722 kb on - strand at 2874.742 kb on - strand at 2874.794 kb on - strand at 2874.836 kb on - strand at 2874.850 kb on - strand at 2875.009 kb on - strand, within Dshi_2713 at 2875.044 kb on - strand, within Dshi_2713 at 2875.078 kb on - strand, within Dshi_2713 at 2875.157 kb on + strand, within Dshi_2713 at 2875.246 kb on + strand, within Dshi_2713 at 2875.363 kb on + strand, within Dshi_2713 at 2875.433 kb on + strand, within Dshi_2713 at 2875.435 kb on + strand, within Dshi_2713 at 2875.461 kb on + strand at 2875.623 kb on - strand, within Dshi_2714 at 2875.859 kb on + strand, within Dshi_2714 at 2875.926 kb on + strand, within Dshi_2714 at 2875.934 kb on - strand, within Dshi_2714 at 2876.047 kb on - strand, within Dshi_2714 at 2876.092 kb on - strand, within Dshi_2714 at 2876.120 kb on - strand, within Dshi_2714 at 2876.135 kb on - strand, within Dshi_2714 at 2876.180 kb on + strand at 2876.319 kb on + strand at 2876.326 kb on - strand at 2876.351 kb on + strand at 2876.386 kb on - strand at 2876.703 kb on + strand at 2876.733 kb on - strand at 2876.842 kb on + strand, within Dshi_2715 at 2876.847 kb on + strand, within Dshi_2715 at 2876.855 kb on - strand, within Dshi_2715 at 2876.883 kb on - strand, within Dshi_2715 at 2877.030 kb on - strand, within Dshi_2715 at 2877.130 kb on + strand, within Dshi_2715 at 2877.161 kb on - strand, within Dshi_2715
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 12.5 mM remove 2,874,534 - Dshi_2712 0.66 -0.9 2,874,630 + Dshi_2712 0.80 -1.3 2,874,722 - -0.5 2,874,742 - -0.2 2,874,794 - +0.9 2,874,836 - +0.2 2,874,850 - +0.4 2,875,009 - Dshi_2713 0.30 +0.6 2,875,044 - Dshi_2713 0.35 +0.7 2,875,078 - Dshi_2713 0.40 +0.3 2,875,157 + Dshi_2713 0.50 +0.5 2,875,246 + Dshi_2713 0.62 -0.3 2,875,363 + Dshi_2713 0.78 +0.5 2,875,433 + Dshi_2713 0.87 -0.5 2,875,435 + Dshi_2713 0.87 -0.3 2,875,461 + +0.7 2,875,623 - Dshi_2714 0.14 +0.7 2,875,859 + Dshi_2714 0.49 +0.7 2,875,926 + Dshi_2714 0.59 +1.1 2,875,934 - Dshi_2714 0.60 -0.3 2,876,047 - Dshi_2714 0.77 +0.3 2,876,092 - Dshi_2714 0.83 +1.2 2,876,120 - Dshi_2714 0.87 +0.1 2,876,135 - Dshi_2714 0.90 +0.4 2,876,180 + -0.3 2,876,319 + -0.3 2,876,326 - +1.1 2,876,351 + -0.0 2,876,386 - +0.4 2,876,703 + +0.4 2,876,733 - +0.1 2,876,842 + Dshi_2715 0.14 -0.1 2,876,847 + Dshi_2715 0.14 +1.2 2,876,855 - Dshi_2715 0.15 +0.2 2,876,883 - Dshi_2715 0.17 -0.6 2,877,030 - Dshi_2715 0.28 +0.2 2,877,130 + Dshi_2715 0.36 -1.3 2,877,161 - Dshi_2715 0.38 -1.7
Or see this region's nucleotide sequence