Experiment: LB 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_3482 and Ga0059261_3483 overlap by 4 nucleotides Ga0059261_3483 and Ga0059261_3484 are separated by 28 nucleotides Ga0059261_3484 and Ga0059261_3485 are separated by 47 nucleotides Ga0059261_3485 and Ga0059261_3486 overlap by 4 nucleotides Ga0059261_3486 and Ga0059261_3487 are separated by 15 nucleotides
Ga0059261_3482: Ga0059261_3482 - condensin subunit ScpA, at 3,609,338 to 3,610,072
_3482
Ga0059261_3483: Ga0059261_3483 - segregation and condensation protein B, at 3,610,069 to 3,610,662
_3483
Ga0059261_3484: Ga0059261_3484 - twin arginine-targeting protein translocase, TatA/E family, at 3,610,691 to 3,610,939
_3484
Ga0059261_3485: Ga0059261_3485 - twin arginine-targeting protein translocase TatB, at 3,610,987 to 3,611,421
_3485
Ga0059261_3486: Ga0059261_3486 - Twin arginine targeting (Tat) protein translocase TatC, at 3,611,418 to 3,612,209
_3486
Ga0059261_3487: Ga0059261_3487 - Entericidin EcnA/B family, at 3,612,225 to 3,612,353
_3487
Position (kb)
3610
3611
3612 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3610.049 kb on + strand at 3610.049 kb on + strand at 3610.049 kb on + strand at 3610.050 kb on - strand at 3610.050 kb on - strand at 3610.050 kb on - strand at 3610.050 kb on - strand at 3610.147 kb on - strand, within Ga0059261_3483 at 3610.156 kb on + strand, within Ga0059261_3483 at 3610.157 kb on - strand, within Ga0059261_3483 at 3610.157 kb on - strand, within Ga0059261_3483 at 3610.157 kb on - strand, within Ga0059261_3483 at 3610.157 kb on - strand, within Ga0059261_3483 at 3610.157 kb on - strand, within Ga0059261_3483 at 3610.157 kb on - strand, within Ga0059261_3483 at 3610.210 kb on + strand, within Ga0059261_3483 at 3610.210 kb on + strand, within Ga0059261_3483 at 3610.211 kb on - strand, within Ga0059261_3483 at 3610.357 kb on + strand, within Ga0059261_3483 at 3610.358 kb on - strand, within Ga0059261_3483 at 3610.358 kb on - strand, within Ga0059261_3483 at 3610.640 kb on + strand at 3612.207 kb on + strand at 3612.208 kb on - strand at 3612.208 kb on - strand at 3612.226 kb on + strand at 3612.226 kb on + strand at 3612.226 kb on + strand at 3612.226 kb on + strand at 3612.227 kb on - strand at 3612.227 kb on - strand at 3612.347 kb on + strand at 3612.347 kb on + strand at 3612.347 kb on + strand at 3612.348 kb on - strand at 3612.348 kb on - strand at 3612.348 kb on - strand at 3612.348 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB 37C remove 3,610,049 + -0.9 3,610,049 + -0.7 3,610,049 + -0.8 3,610,050 - +0.0 3,610,050 - +0.5 3,610,050 - -0.1 3,610,050 - +0.4 3,610,147 - Ga0059261_3483 0.13 -0.7 3,610,156 + Ga0059261_3483 0.15 -1.3 3,610,157 - Ga0059261_3483 0.15 -1.5 3,610,157 - Ga0059261_3483 0.15 -1.7 3,610,157 - Ga0059261_3483 0.15 -0.4 3,610,157 - Ga0059261_3483 0.15 -0.1 3,610,157 - Ga0059261_3483 0.15 -1.0 3,610,157 - Ga0059261_3483 0.15 +0.0 3,610,210 + Ga0059261_3483 0.24 -0.3 3,610,210 + Ga0059261_3483 0.24 -0.9 3,610,211 - Ga0059261_3483 0.24 -1.0 3,610,357 + Ga0059261_3483 0.48 -0.1 3,610,358 - Ga0059261_3483 0.49 -0.6 3,610,358 - Ga0059261_3483 0.49 +0.4 3,610,640 + -2.2 3,612,207 + -0.0 3,612,208 - +0.5 3,612,208 - +1.7 3,612,226 + +0.4 3,612,226 + +0.9 3,612,226 + +0.2 3,612,226 + -0.5 3,612,227 - +0.2 3,612,227 - -0.5 3,612,347 + -0.1 3,612,347 + -0.0 3,612,347 + +2.7 3,612,348 - -0.5 3,612,348 - +0.9 3,612,348 - +1.5 3,612,348 - +0.3
Or see this region's nucleotide sequence